Literature DB >> 19137579

The role of the Val57 amino-acid residue in the hinge loop of the human cystatin C. Conformational studies of the beta2-L1-beta3 segments of wild-type human cystatin C and its mutants.

Sylwia Rodziewicz-Motowidło1, Justyna Iwaszkiewicz, Renata Sosnowska, Paulina Czaplewska, Emil Sobolewski, Aneta Szymańska, Krystyna Stachowiak, Adam Liwo.   

Abstract

Human cystatin C (HCC) is one of the amyloidogenic proteins to be shown to oligomerize via a three-dimensional domain swapping mechanism. This process precedes the formation of a stable dimer and proceeds particularly easily in the case of the L68Q mutant. According to the proposed mechanism, dimerization of the HCC precedes conformational changes within the beta2 and beta3 strands. In this article, we present conformational studies, using circular dichroism and MD methods, of the beta2-L1-beta3 (His43-Thr72) fragment of the HCC involved in HCC dimer formation. We also carried out studies of the beta2-L1-beta3 peptide, in which the Val57 residue was replaced by residues promoting beta-turn structure formation (Asp, Asn, or Pro). The present study established that point mutation could modify the structure of the L1 loop in the beta-hairpin peptide. Our results showed that the L1 loop in the peptide excised from human cystatin C is broader than that in cystatin C. In the HCC protein, broadening of the L1 loop together with the unfavorable L68Q mutation in the hydrophobic pocket could be a force sufficient to cause the partial unfolding and then the opening of HCC or its L68Q mutant structure for further dimerization. We presume further that the Asp57 and Asn57 mutations in the L1 loop of HCC could stabilize the closed form of HCC, whereas the Pro57 mutation could lead to the opening of the HCC structure and then to dimer/oligomer formation. Copyright (c) 2009 Wiley Periodicals, Inc.

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Year:  2009        PMID: 19137579     DOI: 10.1002/bip.21140

Source DB:  PubMed          Journal:  Biopolymers        ISSN: 0006-3525            Impact factor:   2.505


  10 in total

1.  Crystallization and preliminary X-ray diffraction analysis of Val57 mutants of the amyloidogenic protein human cystatin C.

Authors:  Marta Orlikowska; Elzbieta Jankowska; Dominika Borek; Zbyszek Otwinowski; Piotr Skowron; Aneta Szymańska
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2011-11-26

2.  Identification of a Steric Zipper Motif in the Amyloidogenic Core of Human Cystatin C and Its Use for the Design of Self-Assembling Peptides.

Authors:  Emilia Iłowska; Jakub Barciszewski; Mariusz Jaskólski; Augustyn Moliński; Maciej Kozak; Aneta Szymańska
Journal:  Int J Mol Sci       Date:  2022-05-22       Impact factor: 6.208

3.  Steered molecular dynamics simulation of the binding of the β2 and β3 regions in domain-swapped human cystatin C dimer.

Authors:  Jianwei He; Linan Xu; Shuo Zhang; Jing Guan; Manli Shen; Hui Li; Youtao Song
Journal:  J Mol Model       Date:  2012-10-12       Impact factor: 1.810

4.  Exploring the Roles of Proline in Three-Dimensional Domain Swapping from Structure Analysis and Molecular Dynamics Simulations.

Authors:  Yongqi Huang; Meng Gao; Zhengding Su
Journal:  Protein J       Date:  2018-02       Impact factor: 2.371

5.  Structural characterization of V57D and V57P mutants of human cystatin C, an amyloidogenic protein.

Authors:  Marta Orlikowska; Aneta Szymańska; Dominika Borek; Zbyszek Otwinowski; Piotr Skowron; Elżbieta Jankowska
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2013-03-14

6.  New Disulphide Bond in Cystatin-Based Protein Scaffold Prevents Domain-Swap-Mediated Oligomerization and Stabilizes the Functionally Active Form.

Authors:  Matja Zalar; Alexander P Golovanov
Journal:  ACS Omega       Date:  2019-10-24

7.  The Influence of the Mixed DPC:SDS Micelle on the Structure and Oligomerization Process of the Human Cystatin C.

Authors:  Przemyslaw Jurczak; Emilia Sikorska; Paulina Czaplewska; Sylwia Rodziewicz-Motowidlo; Igor Zhukov; Aneta Szymanska
Journal:  Membranes (Basel)       Date:  2020-12-24

8.  Influence of point mutations on the stability, dimerization, and oligomerization of human cystatin C and its L68Q variant.

Authors:  Aneta Szymańska; Elżbieta Jankowska; Marta Orlikowska; Izabela Behrendt; Paulina Czaplewska; Sylwia Rodziewicz-Motowidło
Journal:  Front Mol Neurosci       Date:  2012-07-27       Impact factor: 5.639

9.  Application of amide hydrogen/deuterium exchange mass spectrometry for epitope mapping in human cystatin C.

Authors:  Martyna Prądzińska; Izabela Behrendt; Juan Astorga-Wells; Aleksandr Manoilov; Roman A Zubarev; Aleksandra S Kołodziejczyk; Sylwia Rodziewicz-Motowidło; Paulina Czaplewska
Journal:  Amino Acids       Date:  2016-08-29       Impact factor: 3.520

10.  Structural and functional analysis of cystatin E reveals enzymologically relevant dimer and amyloid fibril states.

Authors:  Elfriede Dall; Julia C Hollerweger; Sven O Dahms; Haissi Cui; Katharina Häussermann; Hans Brandstetter
Journal:  J Biol Chem       Date:  2018-07-02       Impact factor: 5.157

  10 in total

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