Literature DB >> 19132933

Generation of DNA interstrand cross-links by post-synthetic reductive amination.

Todor Angelov1, Angelo Guainazzi, Orlando D Schärer.   

Abstract

DNA interstrand cross-links (ICLs) are the clinically most relevant adducts formed by many antitumor agents. To facilitate the study of biological responses triggered by ICLs, we developed a new approach toward the synthesis of mimics of nitrogen mustard ICLs. 7-Deazaguanine residues bearing acetaldehyde groups were incorporated into complementary strands of DNA and cross-link formation induced by double reductive amination. Our strategy enables the synthesis of major groove cross-links in high yields and purity.

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Year:  2009        PMID: 19132933      PMCID: PMC2635425          DOI: 10.1021/ol802719a

Source DB:  PubMed          Journal:  Org Lett        ISSN: 1523-7052            Impact factor:   6.005


  25 in total

1.  DNA Cross-Linking Agents as Antitumor Drugs.

Authors:  Scott R. Rajski; Robert M. Williams
Journal:  Chem Rev       Date:  1998-12-17       Impact factor: 60.622

Review 2.  Preparation of interstrand cross-linked DNA oligonucleotide duplexes.

Authors:  David M Noll; Anne M Noronha; Christopher J Wilds; Paul S Miller
Journal:  Front Biosci       Date:  2004-01-01

Review 3.  DNA interstrand crosslinks: natural and drug-induced DNA adducts that induce unique cellular responses.

Authors:  Orlando D Schärer
Journal:  Chembiochem       Date:  2005-01       Impact factor: 3.164

Review 4.  Formation and repair of interstrand cross-links in DNA.

Authors:  David M Noll; Tracey McGregor Mason; Paul S Miller
Journal:  Chem Rev       Date:  2006-02       Impact factor: 60.622

5.  Oligodeoxynucleotides containing C-7 propyne analogs of 7-deaza-2'-deoxyguanosine and 7-deaza-2'-deoxyadenosine.

Authors:  C A Buhr; R W Wagner; D Grant; B C Froehler
Journal:  Nucleic Acids Res       Date:  1996-08-01       Impact factor: 16.971

Review 6.  Repair of DNA interstrand crosslinks: molecular mechanisms and clinical relevance.

Authors:  P J McHugh; V J Spanswick; J A Hartley
Journal:  Lancet Oncol       Date:  2001-08       Impact factor: 41.316

7.  Interstrand DNA cross-links induced by alpha,beta-unsaturated aldehydes derived from lipid peroxidation and environmental sources.

Authors:  Michael P Stone; Young-Jin Cho; Hai Huang; Hye-Young Kim; Ivan D Kozekov; Albena Kozekova; Hao Wang; Irina G Minko; R Stephen Lloyd; Thomas M Harris; Carmelo J Rizzo
Journal:  Acc Chem Res       Date:  2008-05-24       Impact factor: 22.384

8.  A structural basis for a phosphoramide mustard-induced DNA interstrand cross-link at 5'-d(GAC).

Authors:  Q Dong; D Barsky; M E Colvin; C F Melius; S M Ludeman; J F Moravek; O M Colvin; D D Bigner; P Modrich; H S Friedman
Journal:  Proc Natl Acad Sci U S A       Date:  1995-12-19       Impact factor: 11.205

9.  Synthesis and characterization of DNA containing an N1-2'-deoxyinosine-ethyl-N3-thymidine interstrand cross-link: a structural mimic of the cross-link formed by 1,3-bis-(2-chloroethyl)-1-nitrosourea.

Authors:  Christopher J Wilds; Fei Xu; Anne M Noronha
Journal:  Chem Res Toxicol       Date:  2008-02-08       Impact factor: 3.739

10.  A modified thymine for the synthesis of site-specific thymine-guanine DNA interstrand crosslinks.

Authors:  Jawad Alzeer; Orlando D Schärer
Journal:  Nucleic Acids Res       Date:  2006-08-31       Impact factor: 16.971

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  33 in total

Review 1.  Orchestrating the nucleases involved in DNA interstrand cross-link (ICL) repair.

Authors:  Blanka Sengerová; Anderson T Wang; Peter J McHugh
Journal:  Cell Cycle       Date:  2011-12-01       Impact factor: 4.534

Review 2.  Using synthetic DNA interstrand crosslinks to elucidate repair pathways and identify new therapeutic targets for cancer chemotherapy.

Authors:  Angelo Guainazzi; Orlando D Schärer
Journal:  Cell Mol Life Sci       Date:  2010-08-21       Impact factor: 9.261

Review 3.  A role for the base excision repair enzyme NEIL3 in replication-dependent repair of interstrand DNA cross-links derived from psoralen and abasic sites.

Authors:  Zhiyu Yang; Maryam Imani Nejad; Jacqueline Gamboa Varela; Nathan E Price; Yinsheng Wang; Kent S Gates
Journal:  DNA Repair (Amst)       Date:  2017-02-20

4.  Synthesis of sequence-specific DNA-protein conjugates via a reductive amination strategy.

Authors:  Susith Wickramaratne; Shivam Mukherjee; Peter W Villalta; Orlando D Schärer; Natalia Y Tretyakova
Journal:  Bioconjug Chem       Date:  2013-08-16       Impact factor: 4.774

5.  Synthesis of G-N2-(CH2)3-N2-G Trimethylene DNA interstrand cross-links.

Authors:  Francesca Gruppi; Tracy L Johnson Salyard; Carmelo J Rizzo
Journal:  Curr Protoc Nucleic Acid Chem       Date:  2014-03-26

6.  DNA-Protein Cross-Links: Formation, Structural Identities, and Biological Outcomes.

Authors:  Natalia Y Tretyakova; Arnold Groehler; Shaofei Ji
Journal:  Acc Chem Res       Date:  2015-06-02       Impact factor: 22.384

7.  Interstrand DNA-DNA cross-link formation between adenine residues and abasic sites in duplex DNA.

Authors:  Nathan E Price; Kevin M Johnson; Jin Wang; Mostafa I Fekry; Yinsheng Wang; Kent S Gates
Journal:  J Am Chem Soc       Date:  2014-02-20       Impact factor: 15.419

8.  Structural mechanism of DNA interstrand cross-link unhooking by the bacterial FAN1 nuclease.

Authors:  Hyeonseok Jin; Upasana Roy; Gwangrog Lee; Orlando D Schärer; Yunje Cho
Journal:  J Biol Chem       Date:  2018-03-07       Impact factor: 5.157

9.  Bypass of DNA-Protein Cross-links Conjugated to the 7-Deazaguanine Position of DNA by Translesion Synthesis Polymerases.

Authors:  Susith Wickramaratne; Shaofei Ji; Shivam Mukherjee; Yan Su; Matthew G Pence; Lee Lior-Hoffmann; Iwen Fu; Suse Broyde; F Peter Guengerich; Mark Distefano; Orlando D Schärer; Yuk Yin Sham; Natalia Tretyakova
Journal:  J Biol Chem       Date:  2016-09-12       Impact factor: 5.157

10.  On the formation and properties of interstrand DNA-DNA cross-links forged by reaction of an abasic site with the opposing guanine residue of 5'-CAp sequences in duplex DNA.

Authors:  Kevin M Johnson; Nathan E Price; Jin Wang; Mostafa I Fekry; Sanjay Dutta; Derrick R Seiner; Yinsheng Wang; Kent S Gates
Journal:  J Am Chem Soc       Date:  2013-01-11       Impact factor: 15.419

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