Literature DB >> 19132077

Allopolyploidization reduces alternative splicing efficiency for transcripts of the wheat DREB2 homolog, WDREB2.

Akihiro Terashima1, Shigeo Takumi.   

Abstract

The wheat DREB2 homolog, WDREB2, encodes an EREBP/AP2-type transcription factor that activates downstream Cor/Lea genes and plays important roles in abiotic stress responses. WDREB2 expression is posttranscriptionally regulated by alternative splicing. In this study, the alternative splicing patterns of WDREB2 transcripts were compared among wheats of different ploidy levels. In diploid progenitors, alternative splicing rapidly produced functional forms from the WDREB2 transcripts and the levels of the nonfunctional form gradually decreased in response to drought stress; however, in hexaploid wheat lines, including both cultivars and synthetic lines, the nonfunctional form failed to decrease. The accumulation levels of the three spliced forms in synthetic allopolyploids were not equal to the sum of those in the parental lines. These results indicated that allopolyploidization during wheat polyploid evolution inhibited efficient alternative splicing of WDREB2 transcripts.

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Year:  2009        PMID: 19132077     DOI: 10.1139/G08-101

Source DB:  PubMed          Journal:  Genome        ISSN: 0831-2796            Impact factor:   2.166


  16 in total

1.  Variability and expression profile of the DRF1 gene in four cultivars of durum wheat and one triticale under moderate water stress conditions.

Authors:  Arianna Latini; Maria Sperandei; Cristina Cantale; Caterina Arcangeli; Karim Ammar; Patrizia Galeffi
Journal:  Planta       Date:  2012-11-25       Impact factor: 4.116

Review 2.  Polyploidy and novelty: Gottlieb's legacy.

Authors:  Pamela S Soltis; Xiaoxian Liu; D Blaine Marchant; Clayton J Visger; Douglas E Soltis
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2014-08-05       Impact factor: 6.237

3.  Extensive changes to alternative splicing patterns following allopolyploidy in natural and resynthesized polyploids.

Authors:  Renchao Zhou; Noushin Moshgabadi; Keith L Adams
Journal:  Proc Natl Acad Sci U S A       Date:  2011-09-07       Impact factor: 11.205

4.  Discovery and expression profile analysis of AP2/ERF family genes from Triticum aestivum.

Authors:  Jing Zhuang; Jian-Min Chen; Quan-Hong Yao; Fei Xiong; Chao-Cai Sun; Xi-Rong Zhou; Jian Zhang; Ai-Sheng Xiong
Journal:  Mol Biol Rep       Date:  2010-04-21       Impact factor: 2.316

5.  Analysis of Whole-Transcriptome RNA-Seq Data Reveals the Involvement of Alternative Splicing in the Drought Response of Glycyrrhiza uralensis.

Authors:  Guozhi Li; Dengxian Xu; Gang Huang; Quan Bi; Mao Yang; Haitao Shen; Hailiang Liu
Journal:  Front Genet       Date:  2022-05-17       Impact factor: 4.772

6.  Comparative analysis of syntenic genes in grass genomes reveals accelerated rates of gene structure and coding sequence evolution in polyploid wheat.

Authors:  Eduard D Akhunov; Sunish Sehgal; Hanquan Liang; Shichen Wang; Alina R Akhunova; Gaganpreet Kaur; Wanlong Li; Kerrie L Forrest; Deven See; Hana Simková; Yaqin Ma; Matthew J Hayden; Mingcheng Luo; Justin D Faris; Jaroslav Dolezel; Bikram S Gill
Journal:  Plant Physiol       Date:  2012-11-01       Impact factor: 8.340

7.  Virus-Induced Gene Silencing (VIGS) in Aegilops tauschii and Its Use in Functional Analysis of AetDREB2.

Authors:  Elahe Tavakol
Journal:  Mol Biotechnol       Date:  2018-01       Impact factor: 2.695

8.  Genome-wide analysis of alternative splicing divergences between Brassica hexaploid and its parents.

Authors:  Ruihua Wang; Helian Liu; Zhengyi Liu; Jun Zou; Jinling Meng; Jianbo Wang
Journal:  Planta       Date:  2019-05-28       Impact factor: 4.116

Review 9.  Complexity of the alternative splicing landscape in plants.

Authors:  Anireddy S N Reddy; Yamile Marquez; Maria Kalyna; Andrea Barta
Journal:  Plant Cell       Date:  2013-10-31       Impact factor: 11.277

10.  Variation in dehydration tolerance, ABA sensitivity and related gene expression patterns in D-genome progenitor and synthetic hexaploid wheat lines.

Authors:  Yumeto Kurahashi; Akihiro Terashima; Shigeo Takumi
Journal:  Int J Mol Sci       Date:  2009-06-18       Impact factor: 6.208

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