Literature DB >> 19117146

Using RNA interference to study protein function.

Carol D Curtis1, Ann M Nardulli.   

Abstract

RNA interference can be extremely useful in determining the function of an endogenously-expressed protein in its normal cellular environment. In this chapter, we describe a method that uses small interfering RNA (siRNA) to knock down mRNA and protein expression in cultured cells so that the effect of a putative regulatory protein on gene expression can be delineated. Methods of assessing the effectiveness of the siRNA procedure using real time quantitative PCR and Western analysis are also included.

Entities:  

Mesh:

Substances:

Year:  2009        PMID: 19117146      PMCID: PMC3900309          DOI: 10.1007/978-1-60327-575-0_11

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  19 in total

1.  Expression profiling reveals off-target gene regulation by RNAi.

Authors:  Aimee L Jackson; Steven R Bartz; Janell Schelter; Sumire V Kobayashi; Julja Burchard; Mao Mao; Bin Li; Guy Cavet; Peter S Linsley
Journal:  Nat Biotechnol       Date:  2003-05-18       Impact factor: 54.908

Review 2.  Double-stranded RNA as a mediator in sequence-specific genetic silencing and co-suppression.

Authors:  M K Montgomery; A Fire
Journal:  Trends Genet       Date:  1998-07       Impact factor: 11.639

3.  Potent and specific genetic interference by double-stranded RNA in Caenorhabditis elegans.

Authors:  A Fire; S Xu; M K Montgomery; S A Kostas; S E Driver; C C Mello
Journal:  Nature       Date:  1998-02-19       Impact factor: 49.962

4.  Protein disulfide isomerase serves as a molecular chaperone to maintain estrogen receptor alpha structure and function.

Authors:  Jennifer R Schultz-Norton; W Hayes McDonald; John R Yates; Ann M Nardulli
Journal:  Mol Endocrinol       Date:  2006-05-11

5.  The deoxyribonucleic acid repair protein flap endonuclease-1 modulates estrogen-responsive gene expression.

Authors:  Jennifer R Schultz-Norton; Kjirsten A Walt; Yvonne S Ziegler; Ian X McLeod; John R Yates; Lori T Raetzman; Ann M Nardulli
Journal:  Mol Endocrinol       Date:  2007-05-08

6.  Interaction of the tumor metastasis suppressor nonmetastatic protein 23 homologue H1 and estrogen receptor alpha alters estrogen-responsive gene expression.

Authors:  Carol D Curtis; Varsha S Likhite; Ian X McLeod; John R Yates; Ann M Nardulli
Journal:  Cancer Res       Date:  2007-11-01       Impact factor: 12.701

7.  The RNA-induced silencing complex is a Mg2+-dependent endonuclease.

Authors:  Dianne S Schwarz; Yukihide Tomari; Phillip D Zamore
Journal:  Curr Biol       Date:  2004-05-04       Impact factor: 10.834

8.  Rho GDP dissociation inhibitor alpha interacts with estrogen receptor alpha and influences estrogen responsiveness.

Authors:  Saad El Marzouk; Jennifer R Schultz-Norton; Varsha S Likhite; Ian X McLeod; John R Yates; Ann M Nardulli
Journal:  J Mol Endocrinol       Date:  2007-10       Impact factor: 5.098

9.  Sequence, chemical, and structural variation of small interfering RNAs and short hairpin RNAs and the effect on mammalian gene silencing.

Authors:  Jens Harborth; Sayda M Elbashir; Kim Vandenburgh; Heiko Manninga; Stephen A Scaringe; Klaus Weber; Thomas Tuschl
Journal:  Antisense Nucleic Acid Drug Dev       Date:  2003-04

10.  Interaction of estrogen receptor alpha with proliferating cell nuclear antigen.

Authors:  Jennifer R Schultz-Norton; Vivian A Gabisi; Yvonne S Ziegler; Ian X McLeod; John R Yates; Ann M Nardulli
Journal:  Nucleic Acids Res       Date:  2007-07-18       Impact factor: 16.971

View more
  5 in total

Review 1.  Chemical and Biological Tools for the Study of Voltage-Gated Sodium Channels in Electrogenesis and Nociception.

Authors:  Anna V Elleman; J Du Bois
Journal:  Chembiochem       Date:  2022-03-21       Impact factor: 3.461

2.  Second Generation Amphiphilic Poly-Lysine Dendrons Inhibit Glioblastoma Cell Proliferation without Toxicity for Neurons or Astrocytes.

Authors:  Jolanta Janiszewska; Inmaculada Posadas; Pablo Játiva; Marta Bugaj-Zarebska; Zofia Urbanczyk-Lipkowska; Valentín Ceña
Journal:  PLoS One       Date:  2016-11-10       Impact factor: 3.240

3.  Targeted delivery and enhanced gene-silencing activity of centrally modified folic acid-siRNA conjugates.

Authors:  Lidya Salim; Golam Islam; Jean-Paul Desaulniers
Journal:  Nucleic Acids Res       Date:  2020-01-10       Impact factor: 16.971

4.  Replication Study: Coding-independent regulation of the tumor suppressor PTEN by competing endogenous mRNAs.

Authors:  Hongyan Wang; Hanna S Radomska; Mitch A Phelps
Journal:  Elife       Date:  2020-10-19       Impact factor: 8.140

Review 5.  Transgenic Mouse Models in Cancer Research.

Authors:  Ursa Lampreht Tratar; Simon Horvat; Maja Cemazar
Journal:  Front Oncol       Date:  2018-07-20       Impact factor: 6.244

  5 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.