Literature DB >> 19107412

In vivo detection and characterization of sumoylation targets in Saccharomyces cerevisiae.

Helle D Ulrich1, Adelina A Davies.   

Abstract

Ni-NTA affinity chromatography under denaturing conditions has proven to be a powerful method for the isolation of SUMO conjugates from total cell extracts, as it minimizes deconjugation and excludes noncovalent interactions. This chapter describes the use of both His-tagged SUMO and a His-tagged target protein for the characterization of the sumoylation process in the budding yeast Saccharomyces cerevisiae. Two well-studied model substrates, the septin Cdc3 and the replication clamp protein PCNA, are used as examples, but the protocol can easily be adapted to other targets and organisms.

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Year:  2009        PMID: 19107412     DOI: 10.1007/978-1-59745-566-4_6

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  27 in total

1.  Extensive DNA damage-induced sumoylation contributes to replication and repair and acts in addition to the mec1 checkpoint.

Authors:  Catherine A Cremona; Prabha Sarangi; Yan Yang; Lisa E Hang; Sadia Rahman; Xiaolan Zhao
Journal:  Mol Cell       Date:  2012-01-26       Impact factor: 17.970

2.  Disentangling the molecular determinants for Cenp-F localization to nuclear pores and kinetochores.

Authors:  Alessandro Berto; Jinchao Yu; Stéphanie Morchoisne-Bolhy; Chiara Bertipaglia; Richard Vallee; Julien Dumont; Francoise Ochsenbein; Raphael Guerois; Valérie Doye
Journal:  EMBO Rep       Date:  2018-04-09       Impact factor: 8.807

3.  End-joining inhibition at telomeres requires the translocase and polySUMO-dependent ubiquitin ligase Uls1.

Authors:  Rachel Lescasse; Sabrina Pobiega; Isabelle Callebaut; Stéphane Marcand
Journal:  EMBO J       Date:  2013-02-15       Impact factor: 11.598

4.  Yeast ORC sumoylation status fine-tunes origin licensing.

Authors:  Gemma Regan-Mochrie; Timothy Hoggard; Nikhil Bhagwat; Gerard Lynch; Neil Hunter; Dirk Remus; Catherine A Fox; Xiaolan Zhao
Journal:  Genes Dev       Date:  2022-08-04       Impact factor: 12.890

5.  Conserved and unique features of the fission yeast core Atg1 complex.

Authors:  Tamiza Nanji; Xu Liu; Leon H Chew; Franco K Li; Maitree Biswas; Zhong-Qiu Yu; Shan Lu; Meng-Qiu Dong; Li-Lin Du; Daniel J Klionsky; Calvin K Yip
Journal:  Autophagy       Date:  2017-11-23       Impact factor: 16.016

6.  Replication protein A (RPA) sumoylation positively influences the DNA damage checkpoint response in yeast.

Authors:  Nalini Dhingra; Lei Wei; Xiaolan Zhao
Journal:  J Biol Chem       Date:  2018-12-27       Impact factor: 5.157

7.  Integrative analysis reveals unique structural and functional features of the Smc5/6 complex.

Authors:  You Yu; Shibai Li; Zheng Ser; Tanmoy Sanyal; Koyi Choi; Bingbing Wan; Huihui Kuang; Andrej Sali; Alex Kentsis; Dinshaw J Patel; Xiaolan Zhao
Journal:  Proc Natl Acad Sci U S A       Date:  2021-05-11       Impact factor: 11.205

8.  Budding yeast Dma1 and Dma2 participate in regulation of Swe1 levels and localization.

Authors:  Erica Raspelli; Corinne Cassani; Giovanna Lucchini; Roberta Fraschini
Journal:  Mol Biol Cell       Date:  2011-05-11       Impact factor: 4.138

9.  In vivo and in silico analysis of PCNA ubiquitylation in the activation of the Post Replication Repair pathway in S. cerevisiae.

Authors:  Flavio Amara; Riccardo Colombo; Paolo Cazzaniga; Dario Pescini; Attila Csikász-Nagy; Marco Muzi Falconi; Daniela Besozzi; Paolo Plevani
Journal:  BMC Syst Biol       Date:  2013-03-20

10.  RNase H and postreplication repair protect cells from ribonucleotides incorporated in DNA.

Authors:  Federico Lazzaro; Daniele Novarina; Flavio Amara; Danielle L Watt; Jana E Stone; Vincenzo Costanzo; Peter M Burgers; Thomas A Kunkel; Paolo Plevani; Marco Muzi-Falconi
Journal:  Mol Cell       Date:  2012-01-13       Impact factor: 17.970

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