Literature DB >> 19106622

The NFAR's (nuclear factors associated with dsRNA): evolutionarily conserved members of the dsRNA binding protein family.

Glen N Barber1.   

Abstract

The dsRNA binding protein (DRBP) family comprise one or more evolutionarily conserved dsRNA-binding domains (DRBD) of approximately 65-68 amino acids, are found in both eukaryotes and prokaryotes and are even encoded by plants and viruses. DRBP's do not recognize specific nucleotide sequences and primarily interact with approximately 11-16 base pairs present within A-form double helix RNAs, which can include ssRNA's with extensive secondary structure. The DRBP family include TRBP (TAR RNA binding protein), PKR (protein kinase activated by dsRNA), PACT (Protein Activator of PKR), ADAR (Adenosine deaminases acting on RNA), and the RNase III family including DICER, which collectively play important roles in mRNA elongation, RNA interference (RNAi), mRNA editing, stability, splicing and/or export and translation. Here, we focus on the role of DRBP's referred to as the NFARs (Nuclear Factors associated with dsRNA) which are translated from two major alternatively spliced products encoded from a single gene. Evidence indicates that the NFAR proteins play crucial roles in mRNA post-transcriptional regulation, including mRNA stability, export and translation and may also have an important function in host defense.

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Year:  2009        PMID: 19106622     DOI: 10.4161/rna.6.1.7565

Source DB:  PubMed          Journal:  RNA Biol        ISSN: 1547-6286            Impact factor:   4.652


  26 in total

1.  The RNA binding complexes NF45-NF90 and NF45-NF110 associate dynamically with the c-fos gene and function as transcriptional coactivators.

Authors:  Tomoyoshi Nakadai; Aya Fukuda; Miho Shimada; Ken Nishimura; Koji Hisatake
Journal:  J Biol Chem       Date:  2015-09-17       Impact factor: 5.157

2.  ILF2 Is a Regulator of RNA Splicing and DNA Damage Response in 1q21-Amplified Multiple Myeloma.

Authors:  Matteo Marchesini; Yamini Ogoti; Elena Fiorini; Anil Aktas Samur; Luigi Nezi; Marianna D'Anca; Paola Storti; Mehmet Kemal Samur; Irene Ganan-Gomez; Maria Teresa Fulciniti; Nipun Mistry; Shan Jiang; Naran Bao; Valentina Marchica; Antonino Neri; Carlos Bueso-Ramos; Chang-Jiun Wu; Li Zhang; Han Liang; Xinxin Peng; Nicola Giuliani; Giulio Draetta; Karen Clise-Dwyer; Hagop Kantarjian; Nikhil Munshi; Robert Orlowski; Guillermo Garcia-Manero; Ronald A DePinho; Simona Colla
Journal:  Cancer Cell       Date:  2017-06-29       Impact factor: 31.743

3.  DRBP76 associates with Ebola virus VP35 and suppresses viral polymerase function.

Authors:  Reed S Shabman; Daisy W Leung; Joshua Johnson; Nicole Glennon; Erol E Gulcicek; Kathryn L Stone; Lawrence Leung; Lisa Hensley; Gaya K Amarasinghe; Christopher F Basler
Journal:  J Infect Dis       Date:  2011-11       Impact factor: 5.226

4.  HIV-1 replication and latency are regulated by translational control of cyclin T1.

Authors:  Mainul Hoque; Raghavendra A Shamanna; Deyu Guan; Tsafi Pe'ery; Michael B Mathews
Journal:  J Mol Biol       Date:  2011-07-29       Impact factor: 5.469

5.  The NF90/NF45 complex participates in DNA break repair via nonhomologous end joining.

Authors:  Raghavendra A Shamanna; Mainul Hoque; Anita Lewis-Antes; Edouard I Azzam; David Lagunoff; Tsafi Pe'ery; Michael B Mathews
Journal:  Mol Cell Biol       Date:  2011-10-03       Impact factor: 4.272

Review 6.  The multiple functions of TRBP, at the hub of cell responses to viruses, stress, and cancer.

Authors:  Sylvanne M Daniels; Anne Gatignol
Journal:  Microbiol Mol Biol Rev       Date:  2012-09       Impact factor: 11.056

7.  hnRNP L and NF90 interact with hepatitis C virus 5'-terminal untranslated RNA and promote efficient replication.

Authors:  You Li; Takahiro Masaki; Tetsuro Shimakami; Stanley M Lemon
Journal:  J Virol       Date:  2014-04-09       Impact factor: 5.103

8.  Upregulated expression of ILF2 in non-small cell lung cancer is associated with tumor cell proliferation and poor prognosis.

Authors:  Tingting Ni; Guoxin Mao; Qun Xue; Yifei Liu; Buyou Chen; Xuefan Cui; Liting Lv; Liangliang Jia; Yuchan Wang; Lili Ji
Journal:  J Mol Histol       Date:  2015-06-10       Impact factor: 2.611

9.  Nuclear factor NF45 interacts with viral proteins of infectious bursal disease virus and inhibits viral replication.

Authors:  Ruth L O Stricker; Sven-Erik Behrens; Egbert Mundt
Journal:  J Virol       Date:  2010-08-11       Impact factor: 5.103

10.  A systematic mammalian genetic interaction map reveals pathways underlying ricin susceptibility.

Authors:  Michael C Bassik; Martin Kampmann; Robert Jan Lebbink; Shuyi Wang; Marco Y Hein; Ina Poser; Jimena Weibezahn; Max A Horlbeck; Siyuan Chen; Matthias Mann; Anthony A Hyman; Emily M Leproust; Michael T McManus; Jonathan S Weissman
Journal:  Cell       Date:  2013-02-08       Impact factor: 41.582

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