Literature DB >> 19106602

Stem cells do play with dice: a statistical physics view of transcription.

Sol Efroni1, Shai Melcer, Malka Nissim-Rafinia, Eran Meshorer.   

Abstract

Embryonic stem cells display wide-spread pervasive transcriptional output. Here, we propose that multiple simultaneous transcriptional states underlay pluripotency.

Mesh：

Year:  2009        PMID： 19106602     DOI： 10.4161/cc.8.1.7216

Source DB:  PubMed          Journal:  Cell Cycle        ISSN： 1551-4005            Impact factor:   4.534


  8 in total

1.  H3K9 histone acetylation predicts pluripotency and reprogramming capacity of ES cells.

Authors:  Hadas Hezroni; Itai Tzchori; Anna Davidi; Anna Mattout; Alva Biran; Malka Nissim-Rafinia; Heiner Westphal; Eran Meshorer
Journal:  Nucleus       Date:  2011-07-01       Impact factor: 4.197

2.  Epigenetics and chromatin plasticity in embryonic stem cells.

Authors:  Terézia Přikrylová; Jiří Pacherník; Stanislav Kozubek; Eva Bártová
Journal:  World J Stem Cells       Date:  2013-07-26       Impact factor: 5.326

3.  Transcriptional competence in pluripotency.

Authors:  Edupuganti V S Raghu Ram; Eran Meshorer
Journal:  Genes Dev       Date:  2009-12-15       Impact factor: 11.361

Review 4.  Statistical mechanics meets single-cell biology.

Authors:  Andrew E Teschendorff; Andrew P Feinberg
Journal:  Nat Rev Genet       Date:  2021-04-19       Impact factor: 53.242

5.  Pluripotency-related, valproic acid (VPA)-induced genome-wide histone H3 lysine 9 (H3K9) acetylation patterns in embryonic stem cells.

Authors:  Hadas Hezroni; Badi Sri Sailaja; Eran Meshorer
Journal:  J Biol Chem       Date:  2011-08-17       Impact factor: 5.157

Review 6.  The stem cell--chromatin connection.

Authors:  Yi Sang; Miin-Feng Wu; Doris Wagner
Journal:  Semin Cell Dev Biol       Date:  2009-09-16       Impact factor: 7.727

7.  Replication timing: a fingerprint for cell identity and pluripotency.

Authors:  Tyrone Ryba; Ichiro Hiratani; Takayo Sasaki; Dana Battaglia; Michael Kulik; Jinfeng Zhang; Stephen Dalton; David M Gilbert
Journal:  PLoS Comput Biol       Date:  2011-10-20       Impact factor: 4.475

8.  Histone modifications and lamin A regulate chromatin protein dynamics in early embryonic stem cell differentiation.

Authors:  Shai Melcer; Hadas Hezroni; Eyal Rand; Malka Nissim-Rafinia; Arthur Skoultchi; Colin L Stewart; Michael Bustin; Eran Meshorer
Journal:  Nat Commun       Date:  2012-06-19       Impact factor: 14.919
  8 in total

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