Literature DB >> 19083804

Interpretation of complex DNA profiles using empirical models and a method to measure their robustness.

Peter Gill1, James Curran, Cedric Neumann, Amanda Kirkham, Tim Clayton, Jonathan Whitaker, Jim Lambert.   

Abstract

A new methodology is presented in order to report complex DNA profiles. We have brought together a number of different theories in order to devise a new protocol to interpret complex cases using likelihood ratios. The calculations are designed to be highly conservative and are widely applicable. We apply a low copy number (LCN) interpretation framework, which includes the probabilities of dropout and contamination, to 'conventional' DNA cases. In conventional casework, stutters often compromise calculations when they are observed with the same height as a minor contributor to a mixture. Stutters cannot be distinguished from minor alleles. We compensate by treating them as real alleles and including them in the calculation. By increasing the number of potential contributors to the DNA profile, we can account for the extra alleles that result. We propose that the likelihood ratio is qualified with additional robustness parameters to indicate the probability of misleading evidence in favour of the prosecution, under the assumption that a random man was a contributor instead of the suspect. To do this we apply a new kind of case-specific 'Tippett' test. Although the method is complex, we suggest a 'user-friendly' way to explain the results to a court. The method is easily extended to carry out ranked likelihood ratio (LR) searches for suspects in national DNA databases.

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Year:  2007        PMID: 19083804     DOI: 10.1016/j.fsigen.2007.10.160

Source DB:  PubMed          Journal:  Forensic Sci Int Genet        ISSN: 1872-4973            Impact factor:   4.882


  12 in total

1.  Validation of testing and interpretation protocols for low template DNA samples using AmpFlSTR Identifiler.

Authors:  Theresa Caragine; Rebecca Mikulasovich; Jeannie Tamariz; Ewelina Bajda; James Sebestyen; Howard Baum; Mechthild Prinz
Journal:  Croat Med J       Date:  2009-06       Impact factor: 1.351

Review 2.  DNA reviews: low level DNA profiling.

Authors:  Eleanor A M Graham
Journal:  Forensic Sci Med Pathol       Date:  2008-05-14       Impact factor: 2.007

3.  The MASTiFF panel-a versatile multiple-allele SNP test for forensics.

Authors:  C Phillips; L Manzo; M de la Puente; M Fondevila; M V Lareu
Journal:  Int J Legal Med       Date:  2019-12-21       Impact factor: 2.686

4.  A ranking index for quality assessment of forensic DNA profiles forensic DNA profiles.

Authors:  Johannes Hedman; Ricky Ansell; Anders Nordgaard
Journal:  BMC Res Notes       Date:  2010-11-09

5.  Response to Grisedale and Van Daal: comparison of STR profiling from low template DNA extracts with and without the consensus profiling method.

Authors:  Bas Kokshoorn; Bart J Blankers
Journal:  Investig Genet       Date:  2013-01-03

6.  Comment on Kokshoorn, B, and Blankers, BJ 'Response to Grisedale, KS and van Daal, A: comparison of STR profiling from low template DNA extracts with and without the consensus profiling method'.

Authors:  Kelly Grisedale; Angela van Daal
Journal:  Investig Genet       Date:  2013-01-03

7.  Estimating the number of contributors to two-, three-, and four-person mixtures containing DNA in high template and low template amounts.

Authors:  Jaheida Perez; Adele A Mitchell; Nubia Ducasse; Jeannie Tamariz; Theresa Caragine
Journal:  Croat Med J       Date:  2011-06       Impact factor: 1.351

8.  Efficient construction of match strength distributions for uncertain multi-locus genotypes.

Authors:  Mark W Perlin
Journal:  Heliyon       Date:  2018-10-08

9.  Lab Retriever: a software tool for calculating likelihood ratios incorporating a probability of drop-out for forensic DNA profiles.

Authors:  Keith Inman; Norah Rudin; Ken Cheng; Chris Robinson; Adam Kirschner; Luke Inman-Semerau; Kirk E Lohmueller
Journal:  BMC Bioinformatics       Date:  2015-09-18       Impact factor: 3.169

10.  Current developments in forensic interpretation of mixed DNA samples (Review).

Authors:  Na Hu; Bin Cong; Shujin Li; Chunling Ma; Lihong Fu; Xiaojing Zhang
Journal:  Biomed Rep       Date:  2014-01-28
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