Literature DB >> 19083029

Systematic characterization on electronic structures and spectra for a series of complexes, M(IDB)Cl2 (M = Mn, Fe, Co, Ni, Cu and Zn): a theoretical study.

Yanyan Zhu1, Zhanfen Chen, Zijian Guo, Yan Wang, Guangju Chen.   

Abstract

Theoretical studies on the coordination stabilities, spectra and DNA-binding trend for the series of metal-varied complexes, M(IDB)Cl2 (M = Mn, Fe, Co, Ni, Cu and Zn; IDB = N, N-bis(2-benzimidazolylmethyl) amine), have been carried out by using the DFT/B3LYP method and PCM model. The calculated coordination stabilities (S) for these complexes present a trend of S(Ni) > S(Co) > S(Fe) > S(Cu) > S(Zn) > S(Mn). It has been estimated from the molecular orbital energies of the complexes that the DNA-binding affinities (A) of the complexes are in the order of A(Zn) < A(Mn) < A(Fe) approximately A(Co) < A(Ni) < A(Cu). The studied results indicate that the Cu, Ni and Co complexes with large coordination stabilities present the low virtual orbitals, consequently yielding to the favorable DNA-binding affinities. The spectral properties of excitation energies and oscillator strengths for M(IDB)Cl2 in the ultraviolet region were calculated by TD-DFT/B3LYP method.

Entities:  

Mesh:

Substances:

Year:  2008        PMID: 19083029     DOI: 10.1007/s00894-008-0432-7

Source DB:  PubMed          Journal:  J Mol Model        ISSN: 0948-5023            Impact factor:   1.810


  43 in total

1.  Density functional investigation of reactive intermediates derived from alkyne-Co2(CO)6 complexes.

Authors:  A Pfletschinger; L W Koch; H G Schmalz
Journal:  Chemistry       Date:  2001-12-17       Impact factor: 5.236

2.  Combined experimental and DFT-TDDFT computational study of photoelectrochemical cell ruthenium sensitizers.

Authors:  Mohammad K Nazeeruddin; Filippo De Angelis; Simona Fantacci; Annabella Selloni; Guido Viscardi; Paul Liska; Seigo Ito; Bessho Takeru; Michael Grätzel
Journal:  J Am Chem Soc       Date:  2005-12-07       Impact factor: 15.419

3.  Synthesis and DNA cleavage activities of mononuclear macrocyclic polyamine zinc(II), copper(II), cobalt(II) complexes which linked with uracil.

Authors:  Xiao-Yan Wang; Ji Zhang; Kun Li; Ning Jiang; Shan-Yong Chen; Hong-Hui Lin; Yu Huang; Li-Jian Ma; Xiao-Qi Yu
Journal:  Bioorg Med Chem       Date:  2006-06-22       Impact factor: 3.641

4.  Synthesis and DNA interactions of benzimidazole dications which have activity against opportunistic infections.

Authors:  R L Lombardy; F A Tanious; K Ramachandran; R R Tidwell; W D Wilson
Journal:  J Med Chem       Date:  1996-03-29       Impact factor: 7.446

5.  Photooxidation of DNA by a cobalt(II) tridentate complex.

Authors:  Vaidyanathan Ganesan Vaidyanathan; Balachandran Unni Nair
Journal:  J Inorg Biochem       Date:  2003-02-01       Impact factor: 4.155

6.  Density functional theory calculations of selected Ru(II) two ring diimine complex dications.

Authors:  Stanislav R Stoyanov; John M Villegas; D P Rillema
Journal:  Inorg Chem       Date:  2002-06-03       Impact factor: 5.165

7.  Oxidative damage by ruthenium complexes containing the dipyridophenazine ligand or its derivatives: a focus on intercalation.

Authors:  Sarah Delaney; Matthias Pascaly; Pratip K Bhattacharya; Koun Han; Jacqueline K Barton
Journal:  Inorg Chem       Date:  2002-04-08       Impact factor: 5.165

8.  Minor-groove recognition of the self-complementary duplex d(CGCGAATTCGCG)2 by Hoechst 33258: a high-field NMR study.

Authors:  J A Parkinson; J Barber; K T Douglas; J Rosamond; D Sharples
Journal:  Biochemistry       Date:  1990-11-06       Impact factor: 3.162

9.  Characterization of dipyridophenazine complexes of ruthenium(II): the light switch effect as a function of nucleic acid sequence and conformation.

Authors:  Y Jenkins; A E Friedman; N J Turro; J K Barton
Journal:  Biochemistry       Date:  1992-11-10       Impact factor: 3.162

10.  The molecular structure of the complex of Hoechst 33258 and the DNA dodecamer d(CGCGAATTCGCG).

Authors:  M K Teng; N Usman; C A Frederick; A H Wang
Journal:  Nucleic Acids Res       Date:  1988-03-25       Impact factor: 16.971

View more
  2 in total

1.  Density functional theory studies on the inclusion complexes of cyclic decapeptide with 1-phenyl-1-propanol enantiomers.

Authors:  Hongge Zhao; Yanyan Zhu; Mingqiong Tong; Juan He; Chunmei Liu; Mingsheng Tang
Journal:  J Mol Model       Date:  2011-05-28       Impact factor: 1.810

2.  Investigation and improvement of DNA cleavage models of polyamide + Cu(II) nuclease + OOH- ligands bound to DNA.

Authors:  Hongwei Yue; Yanyan Zhu; Yan Wang; Guangju Chen
Journal:  BMC Struct Biol       Date:  2010-10-17
  2 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.