Literature DB >> 19082872

Strategies for folding of affinity tagged proteins using GroEL and osmolytes.

Hiroo Katayama1, Mitchell McGill, Andrew Kearns, Marek Brzozowski, Nicholas Degner, Bliss Harnett, Boris Kornilayev, Dubravka Matković-Calogović, Todd Holyoak, James P Calvet, Edward P Gogol, John Seed, Mark T Fisher.   

Abstract

Obtaining a proper fold of affinity tagged chimera proteins can be difficult. Frequently, the protein of interest aggregates after the chimeric affinity tag is cleaved off, even when the entire chimeric construct is initially soluble. If the attached protein is incorrectly folded, chaperone proteins such as GroEL bind to the misfolded construct and complicate both folding and affinity purification. Since chaperonin/osmolyte mixtures facilitate correct folding from the chaperonin, we explored the possibility that we could use this intrinsic binding reaction to advantage to refold two difficult-to-fold chimeric constructs. In one instance, we were able to recover activity from a properly folded construct after the construct was released from the chaperonin in the presence of osmolytes. As an added advantage, we have also found that this method involving chaperonins can enable researchers to decide (1) if further stabilization of the folded product is required and (2) if the protein construct in question will ever be competent to fold with osmolytes.

Entities:  

Mesh:

Substances:

Year:  2008        PMID: 19082872      PMCID: PMC3693453          DOI: 10.1007/s10969-008-9053-8

Source DB:  PubMed          Journal:  J Struct Funct Genomics        ISSN: 1345-711X


  28 in total

1.  GroEL/GroES-mediated folding of a protein too large to be encapsulated.

Authors:  T K Chaudhuri; G W Farr; W A Fenton; S Rospert; A L Horwich
Journal:  Cell       Date:  2001-10-19       Impact factor: 41.582

2.  Classification and reconstruction of a heterogeneous set of electron microscopic images: a case study of GroEL-substrate complexes.

Authors:  S Falke; M T Fisher; E P Gogol
Journal:  J Struct Biol       Date:  2001 Feb-Mar       Impact factor: 2.867

3.  Structural changes in GroEL effected by binding a denatured protein substrate.

Authors:  S Falke; M T Fisher; E P Gogol
Journal:  J Mol Biol       Date:  2001-05-11       Impact factor: 5.469

4.  GroEL stability and function. Contribution of the ionic interactions at the inter-ring contact sites.

Authors:  Begoña Sot; Sonia Bañuelos; Jose María Valpuesta; Arturo Muga
Journal:  J Biol Chem       Date:  2003-06-09       Impact factor: 5.157

5.  Chaperonin-assisted folding of glutamine synthetase under nonpermissive conditions: off-pathway aggregation propensity does not determine the co-chaperonin requirement.

Authors:  P A Voziyan; M T Fisher
Journal:  Protein Sci       Date:  2000-12       Impact factor: 6.725

6.  A comparison of the GroE chaperonin requirements for sequentially and structurally homologous malate dehydrogenases: the importance of folding kinetics and solution environment.

Authors:  B C Tieman; M F Johnston; M T Fisher
Journal:  J Biol Chem       Date:  2001-09-10       Impact factor: 5.157

7.  Complex interactions between the chaperonin 60 molecular chaperone and dihydrofolate reductase.

Authors:  P V Viitanen; G K Donaldson; G H Lorimer; T H Lubben; A A Gatenby
Journal:  Biochemistry       Date:  1991-10-08       Impact factor: 3.162

8.  The polycystic kidney disease protein PKD2 interacts with Hax-1, a protein associated with the actin cytoskeleton.

Authors:  A R Gallagher; A Cedzich; N Gretz; S Somlo; R Witzgall
Journal:  Proc Natl Acad Sci U S A       Date:  2000-04-11       Impact factor: 11.205

9.  The purification, characterization, and activation of phosphoenolpyruvate carboxykinase from chicken liver mitochondria.

Authors:  C A Hebda; T Nowak
Journal:  J Biol Chem       Date:  1982-05-25       Impact factor: 5.157

10.  GroEL as a molecular scaffold for structural analysis of the anthrax toxin pore.

Authors:  Hiroo Katayama; Blythe E Janowiak; Marek Brzozowski; Jordan Juryck; Scott Falke; Edward P Gogol; R John Collier; Mark T Fisher
Journal:  Nat Struct Mol Biol       Date:  2008-06-22       Impact factor: 15.369

View more
  4 in total

1.  Escherichia coli thioredoxin-like protein YbbN contains an atypical tetratricopeptide repeat motif and is a negative regulator of GroEL.

Authors:  Jiusheng Lin; Mark A Wilson
Journal:  J Biol Chem       Date:  2011-04-15       Impact factor: 5.157

Review 2.  On the design of broad based screening assays to identify potential pharmacological chaperones of protein misfolding diseases.

Authors:  Subhashchandra Naik; Na Zhang; Phillip Gao; Mark T Fisher
Journal:  Curr Top Med Chem       Date:  2012       Impact factor: 3.295

3.  Chaperonin-Based Biolayer Interferometry To Assess the Kinetic Stability of Metastable, Aggregation-Prone Proteins.

Authors:  Wendy A Lea; Pierce T O'Neil; Alexandra J Machen; Subhashchandra Naik; Tapan Chaudhri; Wesley McGinn-Straub; Alexander Tischer; Matthew T Auton; Joshua R Burns; Michael R Baldwin; Karen R Khar; John Karanicolas; Mark T Fisher
Journal:  Biochemistry       Date:  2016-08-19       Impact factor: 3.162

4.  Probing the kinetic stabilities of Friedreich's ataxia clinical variants using a solid phase GroEL chaperonin capture platform.

Authors:  Ana R Correia; Subhashchandra Naik; Mark T Fisher; Cláudio M Gomes
Journal:  Biomolecules       Date:  2014-10-20
  4 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.