Literature DB >> 19082138

Computational models reconstruct gene regulatory networks.

Anastasios Bezerianos1, Ioannis A Maraziotis.   

Abstract

The post-genomic era is flooded with data from high-throughput techniques such as cDNA microarrays. In the field of systems biology the reconstruction of gene regulatory networks from gene expression data is one of the major problems in understanding complex cell functions. Drawing conclusions from microarray data requires sophisticated computational analyses that will explore causal genetic relations. In this paper we provide a brief summary of some of the most recent and promising computational models and mathematical frameworks used to reconstruct, model and infer gene regulatory networks from data.

Mesh:

Year:  2008        PMID: 19082138     DOI: 10.1039/b800446n

Source DB:  PubMed          Journal:  Mol Biosyst        ISSN: 1742-2051


  5 in total

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Journal:  Brief Funct Genomics       Date:  2010-09-22       Impact factor: 4.241

2.  SYSGENET: a meeting report from a new European network for systems genetics.

Authors:  Klaus Schughart
Journal:  Mamm Genome       Date:  2010-07-11       Impact factor: 2.957

3.  Gene regulatory networks modelling using a dynamic evolutionary hybrid.

Authors:  Ioannis A Maraziotis; Andrei Dragomir; Dimitris Thanos
Journal:  BMC Bioinformatics       Date:  2010-03-18       Impact factor: 3.169

4.  Identifying potential survival strategies of HIV-1 through virus-host protein interaction networks.

Authors:  David van Dijk; Gokhan Ertaylan; Charles Ab Boucher; Peter Ma Sloot
Journal:  BMC Syst Biol       Date:  2010-07-15

5.  Network component analysis provides quantitative insights on an Arabidopsis transcription factor-gene regulatory network.

Authors:  Ashish Misra; Ganesh Sriram
Journal:  BMC Syst Biol       Date:  2013-11-14
  5 in total

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