Literature DB >> 19079764

Information Conversion, Effective Samples, and Parameter Size.

Xiaodong Lin1, Jennifer Pittman, Bertrand Clarke.   

Abstract

Consider the relative entropy between a posterior density for a parameter given a sample and a second posterior density for the same parameter, based on a different model and a different data set. Then the relative entropy can be minimized over the second sample to get a virtual sample that would make the second posterior as close as possible to the first in an informational sense. If the first posterior is based on a dependent dataset and the second posterior uses an independence model, the effective inferential power of the dependent sample is transferred into the independent sample by the optimization. Examples of this optimization are presented for models with nuisance parameters, finite mixture models, and models for correlated data. Our approach is also used to choose the effective parameter size in a Bayesian hierarchical model.

Year:  2007        PMID: 19079764      PMCID: PMC2600563          DOI: 10.1109/TIT.2007.909168

Source DB:  PubMed          Journal:  IEEE Trans Inf Theory        ISSN: 0018-9448            Impact factor:   2.501


  7 in total

1.  Making sense of microarray data distributions.

Authors:  David C Hoyle; Magnus Rattray; Ray Jupp; Andrew Brass
Journal:  Bioinformatics       Date:  2002-04       Impact factor: 6.937

2.  Adjustment of systematic microarray data biases.

Authors:  Monica Benito; Joel Parker; Quan Du; Junyuan Wu; Dong Xiang; Charles M Perou; J S Marron
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3.  Exploration, normalization, and summaries of high density oligonucleotide array probe level data.

Authors:  Rafael A Irizarry; Bridget Hobbs; Francois Collin; Yasmin D Beazer-Barclay; Kristen J Antonellis; Uwe Scherf; Terence P Speed
Journal:  Biostatistics       Date:  2003-04       Impact factor: 5.899

4.  A cross-study comparison of gene expression studies for the molecular classification of lung cancer.

Authors:  Giovanni Parmigiani; Elizabeth S Garrett-Mayer; Ramaswamy Anbazhagan; Edward Gabrielson
Journal:  Clin Cancer Res       Date:  2004-05-01       Impact factor: 12.531

Review 5.  Expression profiling--best practices for data generation and interpretation in clinical trials.

Authors: 
Journal:  Nat Rev Genet       Date:  2004-03       Impact factor: 53.242

6.  A model of molecular interactions on short oligonucleotide microarrays.

Authors:  Li Zhang; Michael F Miles; Kenneth D Aldape
Journal:  Nat Biotechnol       Date:  2003-06-08       Impact factor: 54.908

7.  Model-based analysis of oligonucleotide arrays: expression index computation and outlier detection.

Authors:  C Li; W H Wong
Journal:  Proc Natl Acad Sci U S A       Date:  2001-01-02       Impact factor: 11.205

  7 in total

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