Literature DB >> 19076068

Small regulatory non-coding RNAs in bacteria: physiology and mechanistic aspects.

Francis Repoila1, Fabien Darfeuille.   

Abstract

Regulatory ncRNAs (non-coding RNAs) adjust bacterial physiology in response to environmental cues. ncRNAs can base-pair to mRNAs and change their translation efficiency and/or their stability, or they can bind to proteins and modulate their activity. ncRNAs have been discovered in several species throughout the bacterial kingdom. This review illustrates the diversity of physiological processes and molecular mechanisms where ncRNAs are key regulators.

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Year:  2009        PMID： 19076068     DOI： 10.1042/BC20070137

Source DB:  PubMed          Journal:  Biol Cell        ISSN： 0248-4900            Impact factor:   4.458


  82 in total

1.  "Hypothesis for the modern RNA world": a pervasive non-coding RNA-based genetic regulation is a prerequisite for the emergence of multicellular complexity.

Authors:  Irma Lozada-Chávez; Peter F Stadler; Sonja J Prohaska
Journal:  Orig Life Evol Biosph       Date:  2012-02-10       Impact factor: 1.950

2.  Small genes under sporulation control in the Bacillus subtilis genome.

Authors:  Matthias Schmalisch; Elisa Maiques; Lachezar Nikolov; Amy H Camp; Bastien Chevreux; Andrea Muffler; Sabrina Rodriguez; John Perkins; Richard Losick
Journal:  J Bacteriol       Date:  2010-08-13       Impact factor: 3.490

3.  Function of plastid sigma factors in higher plants: regulation of gene expression or just preservation of constitutive transcription?

Authors:  Silva Lerbs-Mache
Journal:  Plant Mol Biol       Date:  2010-11-25       Impact factor: 4.076

4.  Disruption of small RNA signaling caused by competition for Hfq.

Authors:  Razika Hussein; Han N Lim
Journal:  Proc Natl Acad Sci U S A       Date:  2010-12-28       Impact factor: 11.205

5.  The modulation of Staphylococcus aureus mRNA turnover.

Authors:  John M Morrison; Paul M Dunman
Journal:  Future Microbiol       Date:  2011-10       Impact factor: 3.165

6.  Identification of 88 regulatory small RNAs in the TIGR4 strain of the human pathogen Streptococcus pneumoniae.

Authors:  Paloma Acebo; Antonio J Martin-Galiano; Sara Navarro; Angel Zaballos; Mónica Amblar
Journal:  RNA       Date:  2012-01-24       Impact factor: 4.942

7.  Design and use of synthetic regulatory small RNAs to control gene expression in Escherichia coli.

Authors:  Seung Min Yoo; Dokyun Na; Sang Yup Lee
Journal:  Nat Protoc       Date:  2013-08-08       Impact factor: 13.491

8.  Requirement of the CsdA DEAD-box helicase for low temperature riboregulation of rpoS mRNA.

Authors:  Armin Resch; Branislav Većerek; Kristina Palavra; Udo Bläsi
Journal:  RNA Biol       Date:  2010-11-01       Impact factor: 4.652

9.  Proteomic alterations explain phenotypic changes in Sinorhizobium meliloti lacking the RNA chaperone Hfq.

Authors:  Lise Barra-Bily; Catherine Fontenelle; Gwenael Jan; Maud Flechard; Annie Trautwetter; Shree P Pandey; Graham C Walker; Carlos Blanco
Journal:  J Bacteriol       Date:  2010-01-15       Impact factor: 3.490

10.  In silico 'fishing' using known small regulatory RNA (sRNA) candidates as the decoy from Escherichia coli, Salmonella typhi and Salmonella typhimurium manifested 14 novel sRNA candidates in the orthologous region of Proteus mirabilis.

Authors:  Selvaraju KishanRaj; Samuggam Sumitha; Balakrishnan Siventhiran; Othayakumar Thiviyaa; Kathiresan V Sathasivam; Rathinam Xavier; Thean-Hock Tang; Marimuthu Citartan; Suresh V Chinni
Journal:  Mol Biol Rep       Date:  2018-10-03       Impact factor: 2.316
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