Literature DB >> 19074378

Characterization of YvcJ, a conserved P-loop-containing protein, and its implication in competence in Bacillus subtilis.

Jennifer Luciano1, Elodie Foulquier, Jean-Raphael Fantino, Anne Galinier, Frédérique Pompeo.   

Abstract

The uncharacterized protein family UPF0042 of the Swiss-Prot database is predicted to be a member of the conserved group of bacterium-specific P-loop-containing proteins. Here we show that two of its members, YvcJ from Bacillus subtilis and YhbJ, its homologue from Escherichia coli, indeed bind and hydrolyze nucleotides. The cellular function of yvcJ was then addressed. In contrast to results recently obtained for E. coli, which indicated that yhbJ mutants strongly overproduced glucosamine-6-phosphate synthase (GlmS), comparison of the wild type with the yvcJ mutant of B. subtilis showed that GlmS expression was quite similar in the two strains. However, in mutants defective in yvcJ, the transformation efficiency and the fraction of cells that expressed competence were reduced. Furthermore, our data show that YvcJ positively controls the expression of late competence genes. The overexpression of comK or comS compensates for the decrease in competence of the yvcJ mutant. Our results show that even if YvcJ and YhbJ belong to the same family of P-loop-containing proteins, the deletion of corresponding genes has different consequences in B. subtilis and in E. coli.

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Year:  2008        PMID: 19074378      PMCID: PMC2648190          DOI: 10.1128/JB.01493-08

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  41 in total

1.  A ComGA-dependent checkpoint limits growth during the escape from competence.

Authors:  B J Haijema; J Hahn; J Haynes; D Dubnau
Journal:  Mol Microbiol       Date:  2001-04       Impact factor: 3.501

Review 2.  DNA uptake in bacteria.

Authors:  D Dubnau
Journal:  Annu Rev Microbiol       Date:  1999       Impact factor: 15.500

3.  Three-dimensional view of the surface motif associated with the P-loop structure: cis and trans cases of convergent evolution.

Authors:  A Via; F Ferrè; B Brannetti; A Valencia; M Helmer-Citterich
Journal:  J Mol Biol       Date:  2000-11-03       Impact factor: 5.469

4.  The pleiotropic response regulator DegU functions as a priming protein in competence development in Bacillus subtilis.

Authors:  L W Hamoen; A F Van Werkhoven; G Venema; D Dubnau
Journal:  Proc Natl Acad Sci U S A       Date:  2000-08-01       Impact factor: 11.205

5.  Structural genomics analysis: characteristics of atypical, common, and horizontally transferred folds.

Authors:  Hedi Hegyi; Jimmy Lin; Dov Greenbaum; Mark Gerstein
Journal:  Proteins       Date:  2002-05-01

6.  Rok (YkuW) regulates genetic competence in Bacillus subtilis by directly repressing comK.

Authors:  Tran Thu Hoa; Pablo Tortosa; Mark Albano; David Dubnau
Journal:  Mol Microbiol       Date:  2002-01       Impact factor: 3.501

7.  Regulatory inputs for the synthesis of ComK, the competence transcription factor of Bacillus subtilis.

Authors:  J Hahn; A Luttinger; D Dubnau
Journal:  Mol Microbiol       Date:  1996-08       Impact factor: 3.501

8.  Localization of GerAA and GerAC germination proteins in the Bacillus subtilis spore.

Authors:  K D Hudson; B M Corfe; E H Kemp; I M Feavers; P J Coote; A Moir
Journal:  J Bacteriol       Date:  2001-07       Impact factor: 3.490

9.  The Bacillus subtilis crh gene encodes a HPr-like protein involved in carbon catabolite repression.

Authors:  A Galinier; J Haiech; M C Kilhoffer; M Jaquinod; J Stülke; J Deutscher; I Martin-Verstraete
Journal:  Proc Natl Acad Sci U S A       Date:  1997-08-05       Impact factor: 11.205

Review 10.  Controlling competence in Bacillus subtilis: shared use of regulators.

Authors:  Leendert W Hamoen; Gerard Venema; Oscar P Kuipers
Journal:  Microbiology (Reading)       Date:  2003-01       Impact factor: 2.777

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  8 in total

1.  Crystallization and preliminary X-ray diffraction analysis of YhbJ from Escherichia coli, a key protein involved in the GlmYZ sRNA regulatory cascade.

Authors:  Marcus Resch; Yvonne Göpel; Boris Görke; Ralf Ficner
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2013-01-30

2.  Targeted decay of a regulatory small RNA by an adaptor protein for RNase E and counteraction by an anti-adaptor RNA.

Authors:  Yvonne Göpel; Kai Papenfort; Birte Reichenbach; Jörg Vogel; Boris Görke
Journal:  Genes Dev       Date:  2013-03-01       Impact factor: 11.361

3.  The conserved DNA-binding protein WhiA is involved in cell division in Bacillus subtilis.

Authors:  Katarina Surdova; Pamela Gamba; Dennis Claessen; Tjalling Siersma; Martijs J Jonker; Jeff Errington; Leendert W Hamoen
Journal:  J Bacteriol       Date:  2013-10-04       Impact factor: 3.490

4.  Structural insights into RapZ-mediated regulation of bacterial amino-sugar metabolism.

Authors:  Grecia M Gonzalez; Svetlana Durica-Mitic; Steven W Hardwick; Martin C Moncrieffe; Marcus Resch; Piotr Neumann; Ralf Ficner; Boris Görke; Ben F Luisi
Journal:  Nucleic Acids Res       Date:  2017-10-13       Impact factor: 16.971

Review 5.  Ménage à trois: post-transcriptional control of the key enzyme for cell envelope synthesis by a base-pairing small RNA, an RNase adaptor protein, and a small RNA mimic.

Authors:  Yvonne Göpel; Muna A Khan; Boris Görke
Journal:  RNA Biol       Date:  2014-02-27       Impact factor: 4.652

6.  A metabolic checkpoint protein GlmR is important for diverting carbon into peptidoglycan biosynthesis in Bacillus subtilis.

Authors:  Vaidehi Patel; Qun Wu; Pete Chandrangsu; John D Helmann
Journal:  PLoS Genet       Date:  2018-09-24       Impact factor: 5.917

7.  Small RNA-binding protein RapZ mediates cell envelope precursor sensing and signaling in Escherichia coli.

Authors:  Muna A Khan; Svetlana Durica-Mitic; Yvonne Göpel; Ralf Heermann; Boris Görke
Journal:  EMBO J       Date:  2020-02-17       Impact factor: 11.598

8.  Uridine diphosphate N-acetylglucosamine orchestrates the interaction of GlmR with either YvcJ or GlmS in Bacillus subtilis.

Authors:  Elodie Foulquier; Frédérique Pompeo; Deborah Byrne; Henri-Pierre Fierobe; Anne Galinier
Journal:  Sci Rep       Date:  2020-09-29       Impact factor: 4.379

  8 in total

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