Literature DB >> 19066512

Application of a C. elegans dopamine neuron degeneration assay for the validation of potential Parkinson's disease genes.

Laura A Berkowitz1, Shusei Hamamichi, Adam L Knight, Adam J Harrington, Guy A Caldwell, Kim A Caldwell.   

Abstract

Improvements to the diagnosis and treatment of Parkinson's disease (PD) are dependent upon knowledge about susceptibility factors that render populations at risk. In the process of attempting to identify novel genetic factors associated with PD, scientists have generated many lists of candidate genes, polymorphisms, and proteins that represent important advances, but these leads remain mechanistically undefined. Our work is aimed toward significantly narrowing such lists by exploiting the advantages of a simple animal model system. While humans have billions of neurons, the microscopic roundworm Caenorhabditis elegans has precisely 302, of which only eight produce dopamine (DA) in hemaphrodites. Expression of a human gene encoding the PD-associated protein, alpha-synuclein, in C. elegans DA neurons results in dosage and age-dependent neurodegeneration. Worms expressing human alpha-synuclein in DA neurons are isogenic and express both GFP and human alpha-synuclein under the DA transporter promoter (Pdat-1). The presence of GFP serves as a readily visualized marker for following DA neurodegeneration in these animals. We initially demonstrated that alpha-synuclein-induced DA neurodegeneration could be rescued in these animals by torsinA, a protein with molecular chaperone activity. Further, candidate PD-related genes identified in our lab via large-scale RNAi screening efforts using an alpha-synuclein misfolding assay were then over-expressed in C. elegans DA neurons. We determined that five of seven genes tested represented significant candidate modulators of PD as they rescued alpha-synuclein-induced DA neurodegeneration. Additionally, the Lindquist Lab (this issue of JoVE) has performed yeast screens whereby alpha-synuclein-dependent toxicity is used as a readout for genes that can enhance or suppress cytotoxicity. We subsequently examined the yeast candidate genes in our C. elegans alpha-synuclein-induced neurodegeneration assay and successfully validated many of these targets. Our methodology involves generation of a C. elegans DA neuron-specific expression vector using recombinational cloning of candidate gene cDNAs under control of the Pdat-1 promoter. These plasmids are then microinjected in wild-type (N2) worms, along with a selectable marker for successful transformation. Multiple stable transgenic lines producing the candidate protein in DA neurons are obtained and then independently crossed into the alpha-synuclein degenerative strain and assessed for neurodegeneration, at both the animal and individual neuron level, over the course of aging.

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Year:  2008        PMID: 19066512      PMCID: PMC3253614          DOI: 10.3791/835

Source DB:  PubMed          Journal:  J Vis Exp        ISSN: 1940-087X            Impact factor:   1.355


  6 in total

1.  Alpha-synuclein blocks ER-Golgi traffic and Rab1 rescues neuron loss in Parkinson's models.

Authors:  Antony A Cooper; Aaron D Gitler; Anil Cashikar; Cole M Haynes; Kathryn J Hill; Bhupinder Bhullar; Kangning Liu; Kexiang Xu; Katherine E Strathearn; Fang Liu; Songsong Cao; Kim A Caldwell; Guy A Caldwell; Gerald Marsischky; Richard D Kolodner; Joshua Labaer; Jean-Christophe Rochet; Nancy M Bonini; Susan Lindquist
Journal:  Science       Date:  2006-06-22       Impact factor: 47.728

2.  Torsin-mediated protection from cellular stress in the dopaminergic neurons of Caenorhabditis elegans.

Authors:  Songsong Cao; Christopher C Gelwix; Kim A Caldwell; Guy A Caldwell
Journal:  J Neurosci       Date:  2005-04-13       Impact factor: 6.167

3.  The Parkinson's disease protein alpha-synuclein disrupts cellular Rab homeostasis.

Authors:  Aaron D Gitler; Brooke J Bevis; James Shorter; Katherine E Strathearn; Shusei Hamamichi; Linhui Julie Su; Kim A Caldwell; Guy A Caldwell; Jean-Christophe Rochet; J Michael McCaffery; Charles Barlowe; Susan Lindquist
Journal:  Proc Natl Acad Sci U S A       Date:  2007-12-27       Impact factor: 11.205

4.  A simple method for maintaining large, aging populations of Caenorhabditis elegans.

Authors:  S Gandhi; J Santelli; D H Mitchell; J W Stiles; D R Sanadi
Journal:  Mech Ageing Dev       Date:  1980-02       Impact factor: 5.432

5.  The genetics of Caenorhabditis elegans.

Authors:  S Brenner
Journal:  Genetics       Date:  1974-05       Impact factor: 4.562

6.  Hypothesis-based RNAi screening identifies neuroprotective genes in a Parkinson's disease model.

Authors:  Shusei Hamamichi; Renee N Rivas; Adam L Knight; Songsong Cao; Kim A Caldwell; Guy A Caldwell
Journal:  Proc Natl Acad Sci U S A       Date:  2008-01-08       Impact factor: 11.205

  6 in total
  22 in total

Review 1.  Watching worms whither: modeling neurodegeneration in C. elegans.

Authors:  Benjamin Wolozin; Christopher Gabel; Andrew Ferree; Maria Guillily; Atsushi Ebata
Journal:  Prog Mol Biol Transl Sci       Date:  2011       Impact factor: 3.622

2.  N-Methyl-4-phenylpyridinium Scaffold-Containing Lipophilic Compounds Are Potent Complex I Inhibitors and Selective Dopaminergic Toxins.

Authors:  Bryan Lickteig; Virangika K Wimalasena; Kandatege Wimalasena
Journal:  ACS Chem Neurosci       Date:  2019-04-10       Impact factor: 4.418

3.  A molecular readout of long-term olfactory adaptation in C. elegans.

Authors:  Chao He; Jin I Lee; Noelle L'etoile; Damien O'Halloran
Journal:  J Vis Exp       Date:  2012-12-22       Impact factor: 1.355

4.  LRRK2-mediated neurodegeneration and dysfunction of dopaminergic neurons in a Caenorhabditis elegans model of Parkinson's disease.

Authors:  Chen Yao; Rabih El Khoury; Wen Wang; Tara A Byrd; Elizabeth A Pehek; Colin Thacker; Xiongwei Zhu; Mark A Smith; Amy L Wilson-Delfosse; Shu G Chen
Journal:  Neurobiol Dis       Date:  2010-04-09       Impact factor: 5.996

Review 5.  Gene-environment interactions: neurodegeneration in non-mammals and mammals.

Authors:  Michael Aschner; Edward D Levin; Cristina Suñol; James O Olopade; Kirsten J Helmcke; Daiana S Avila; Damiyon Sledge; Rahim H Ali; Lucia Upchurch; Susan Donerly; Elwood Linney; Anna Forsby; Padmavathi Ponnuru; James R Connor
Journal:  Neurotoxicology       Date:  2010-03-30       Impact factor: 4.294

6.  Glutaredoxin deficiency exacerbates neurodegeneration in C. elegans models of Parkinson's disease.

Authors:  William M Johnson; Chen Yao; Sandra L Siedlak; Wenzhang Wang; Xiongwei Zhu; Guy A Caldwell; Amy L Wilson-Delfosse; John J Mieyal; Shu G Chen
Journal:  Hum Mol Genet       Date:  2014-10-29       Impact factor: 6.150

7.  Extracellular dopamine potentiates mn-induced oxidative stress, lifespan reduction, and dopaminergic neurodegeneration in a BLI-3-dependent manner in Caenorhabditis elegans.

Authors:  Alexandre Benedetto; Catherine Au; Daiana Silva Avila; Dejan Milatovic; Michael Aschner
Journal:  PLoS Genet       Date:  2010-08-26       Impact factor: 5.917

8.  Genetic aspects of behavioral neurotoxicology.

Authors:  Edward D Levin; Michael Aschner; Ulrike Heberlein; Douglas Ruden; Kathleen A Welsh-Bohmer; Selena Bartlett; Karen Berger; Lang Chen; Ammon B Corl; Donnie Eddins; Rachael French; Kathleen M Hayden; Kirsten Helmcke; Helmut V B Hirsch; Elwood Linney; Greg Lnenicka; Grier P Page; Debra Possidente; Bernard Possidente; Annette Kirshner
Journal:  Neurotoxicology       Date:  2009-07-30       Impact factor: 4.294

9.  Protective role of DNJ-27/ERdj5 in Caenorhabditis elegans models of human neurodegenerative diseases.

Authors:  Fernando Muñoz-Lobato; María Jesús Rodríguez-Palero; Francisco José Naranjo-Galindo; Freya Shephard; Christopher J Gaffney; Nathaniel J Szewczyk; Shusei Hamamichi; Kim A Caldwell; Guy A Caldwell; Chris D Link; Antonio Miranda-Vizuete
Journal:  Antioxid Redox Signal       Date:  2013-07-03       Impact factor: 8.401

10.  Reversing deleterious protein aggregation with re-engineered protein disaggregases.

Authors:  Meredith E Jackrel; James Shorter
Journal:  Cell Cycle       Date:  2014-04-02       Impact factor: 4.534

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