Literature DB >> 19064916

Superfamily phenomena and motifs of networks induced from time series.

Xiaoke Xu1, Jie Zhang, Michael Small.   

Abstract

We introduce a transformation from time series to complex networks and then study the relative frequency of different subgraphs within that network. The distribution of subgraphs can be used to distinguish between and to characterize different types of continuous dynamics: periodic, chaotic, and periodic with noise. Moreover, although the general types of dynamics generate networks belonging to the same superfamily of networks, specific dynamical systems generate characteristic dynamics. When applied to discrete (map-like) data this technique distinguishes chaotic maps, hyperchaotic maps, and noise data.

Entities:  

Year:  2008        PMID: 19064916      PMCID: PMC2604928          DOI: 10.1073/pnas.0806082105

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  12 in total

1.  Emergence of scaling in random networks

Authors: 
Journal:  Science       Date:  1999-10-15       Impact factor: 47.728

2.  Permutation entropy: a natural complexity measure for time series.

Authors:  Christoph Bandt; Bernd Pompe
Journal:  Phys Rev Lett       Date:  2002-04-11       Impact factor: 9.161

3.  Network motifs: simple building blocks of complex networks.

Authors:  R Milo; S Shen-Orr; S Itzkovitz; N Kashtan; D Chklovskii; U Alon
Journal:  Science       Date:  2002-10-25       Impact factor: 47.728

4.  The topological relationship between the large-scale attributes and local interaction patterns of complex networks.

Authors:  A Vázquez; R Dobrin; D Sergi; J-P Eckmann; Z N Oltvai; A-L Barabási
Journal:  Proc Natl Acad Sci U S A       Date:  2004-12-14       Impact factor: 11.205

5.  Detecting temporal and spatial correlations in pseudoperiodic time series.

Authors:  Jie Zhang; Xiaodong Luo; Tomomichi Nakamura; Junfeng Sun; Michael Small
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2007-01-26

6.  Distinguishing noise from chaos.

Authors:  O A Rosso; H A Larrondo; M T Martin; A Plastino; M A Fuentes
Journal:  Phys Rev Lett       Date:  2007-10-12       Impact factor: 9.161

7.  From time series to complex networks: the visibility graph.

Authors:  Lucas Lacasa; Bartolo Luque; Fernando Ballesteros; Jordi Luque; Juan Carlos Nuño
Journal:  Proc Natl Acad Sci U S A       Date:  2008-03-24       Impact factor: 11.205

8.  Independent coordinates for strange attractors from mutual information.

Authors: 
Journal:  Phys Rev A Gen Phys       Date:  1986-02

9.  Method for generating long-range correlations for large systems.

Authors: 
Journal:  Phys Rev E Stat Phys Plasmas Fluids Relat Interdiscip Topics       Date:  1996-05

10.  Complex network from pseudoperiodic time series: topology versus dynamics.

Authors:  J Zhang; M Small
Journal:  Phys Rev Lett       Date:  2006-06-14       Impact factor: 9.161

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  30 in total

1.  Nonlinear detection of paleoclimate-variability transitions possibly related to human evolution.

Authors:  Jonathan F Donges; Reik V Donner; Martin H Trauth; Norbert Marwan; Hans-Joachim Schellnhuber; Jürgen Kurths
Journal:  Proc Natl Acad Sci U S A       Date:  2011-12-05       Impact factor: 11.205

2.  Visibility Graph Based Time Series Analysis.

Authors:  Mutua Stephen; Changgui Gu; Huijie Yang
Journal:  PLoS One       Date:  2015-11-16       Impact factor: 3.240

3.  Characterizing air quality data from complex network perspective.

Authors:  Xinghua Fan; Li Wang; Huihui Xu; Shasha Li; Lixin Tian
Journal:  Environ Sci Pollut Res Int       Date:  2015-10-22       Impact factor: 4.223

4.  Temperature time series analysis at Yucatan using natural and horizontal visibility algorithms.

Authors:  J Alberto Rosales-Pérez; Efrain Canto-Lugo; David Valdés-Lozano; Rodrigo Huerta-Quintanilla
Journal:  PLoS One       Date:  2019-12-19       Impact factor: 3.240

5.  WLPVG approach to the analysis of EEG-based functional brain network under manual acupuncture.

Authors:  Xin Pei; Jiang Wang; Bin Deng; Xile Wei; Haitao Yu
Journal:  Cogn Neurodyn       Date:  2014-06-03       Impact factor: 5.082

6.  Duality between time series and networks.

Authors:  Andriana S L O Campanharo; M Irmak Sirer; R Dean Malmgren; Fernando M Ramos; Luís A Nunes Amaral
Journal:  PLoS One       Date:  2011-08-11       Impact factor: 3.240

7.  Feigenbaum graphs: a complex network perspective of chaos.

Authors:  Bartolo Luque; Lucas Lacasa; Fernando J Ballesteros; Alberto Robledo
Journal:  PLoS One       Date:  2011-09-07       Impact factor: 3.240

8.  Multi-frequency complex network from time series for uncovering oil-water flow structure.

Authors:  Zhong-Ke Gao; Yu-Xuan Yang; Peng-Cheng Fang; Ning-De Jin; Cheng-Yi Xia; Li-Dan Hu
Journal:  Sci Rep       Date:  2015-02-04       Impact factor: 4.379

9.  A priori data-driven multi-clustered reservoir generation algorithm for echo state network.

Authors:  Xiumin Li; Ling Zhong; Fangzheng Xue; Anguo Zhang
Journal:  PLoS One       Date:  2015-04-13       Impact factor: 3.240

10.  Local network patterns in protein-protein interfaces.

Authors:  Qiang Luo; Rebecca Hamer; Gesine Reinert; Charlotte M Deane
Journal:  PLoS One       Date:  2013-03-08       Impact factor: 3.240

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