Literature DB >> 19064277

Functional domains of the bacteriophage P2 scaffolding protein: identification of residues involved in assembly and protease activity.

Jenny R Chang1, Michael S Spilman, Cynthia M Rodenburg, Terje Dokland.   

Abstract

Bacteriophage P2 encodes a scaffolding protein, gpO, which is required for correct assembly of P2 procapsids from the gpN major capsid protein. The 284 residue gpO protein also acts as a protease, cleaving itself into an N-terminal fragment, O, that remains in the capsid following maturation. In addition, gpO is presumed to act as the maturation protease for gpN, which is N-terminally processed to N, accompanied by DNA packaging and capsid expansion. The protease activity of gpO resides in the N-terminal half of the protein. We show that gpO is a classical serine protease, with a catalytic triad comprised of Asp 19, His 48 and Ser 107. The C-terminal 90 amino acids of gpO are required and sufficient for capsid assembly. This fragment contains a predicted alpha-helical segment between residues 197 and 257 and exists as a multimer in solution, suggesting that oligomerization is required for scaffolding activity. Correct assembly requires the C-terminal cysteine residue, which is most likely involved in transient gpN interactions. Our results suggest a model for gpO scaffolding action in which the N-terminal half of gpO binds strongly to gpN, while oligomerization of the C-terminal alpha-helical domain of gpO and transient interactions between Cys 284 and gpN lead to capsid assembly.

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Year:  2008        PMID: 19064277      PMCID: PMC2655311          DOI: 10.1016/j.virol.2008.11.016

Source DB:  PubMed          Journal:  Virology        ISSN: 0042-6822            Impact factor:   3.616


  25 in total

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Authors:  Y Sun; M H Parker; P Weigele; S Casjens; P E Prevelige; N R Krishna
Journal:  J Mol Biol       Date:  2000-04-14       Impact factor: 5.469

Review 2.  Scaffolding proteins and their role in viral assembly.

Authors:  T Dokland
Journal:  Cell Mol Life Sci       Date:  1999-11-15       Impact factor: 9.261

3.  Cascaded multiple classifiers for secondary structure prediction.

Authors:  M Ouali; R D King
Journal:  Protein Sci       Date:  2000-06       Impact factor: 6.725

4.  The structure of P4 procapsids produced by coexpression of capsid and external scaffolding proteins.

Authors:  Terje Dokland; Sifang Wang; Björn H Lindqvist
Journal:  Virology       Date:  2002-07-05       Impact factor: 3.616

5.  Physical principles in the construction of regular viruses.

Authors:  D L CASPAR; A KLUG
Journal:  Cold Spring Harb Symp Quant Biol       Date:  1962

6.  Bacteriophage HK97: assembly of the capsid and evolutionary connections.

Authors:  Roger W Hendrix
Journal:  Adv Virus Res       Date:  2005       Impact factor: 9.937

7.  Molecular dissection of ø29 scaffolding protein function in an in vitro assembly system.

Authors:  Chi-yu Fu; Marc C Morais; Anthony J Battisti; Michael G Rossmann; Peter E Prevelige
Journal:  J Mol Biol       Date:  2006-12-06       Impact factor: 5.469

8.  The gpQ portal protein of bacteriophage P2 forms dodecameric connectors in crystals.

Authors:  Danny N P Doan; Terje Dokland
Journal:  J Struct Biol       Date:  2006-09-01       Impact factor: 2.867

9.  Incorporation of scaffolding protein gpO in bacteriophages P2 and P4.

Authors:  Jenny R Chang; Anton Poliakov; Peter E Prevelige; James A Mobley; Terje Dokland
Journal:  Virology       Date:  2007-11-01       Impact factor: 3.616

10.  Bacteriophage phi29 scaffolding protein gp7 before and after prohead assembly.

Authors:  Marc C Morais; Shuji Kanamaru; Mohammed O Badasso; Jaya S Koti; Barbara A L Owen; Cynthia T McMurray; Dwight L Anderson; Michael G Rossmann
Journal:  Nat Struct Biol       Date:  2003-07
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  16 in total

1.  Unraveling the role of the C-terminal helix turn helix of the coat-binding domain of bacteriophage P22 scaffolding protein.

Authors:  G Pauline Padilla-Meier; Eddie B Gilcrease; Peter R Weigele; Juliana R Cortines; Molly Siegel; Justin C Leavitt; Carolyn M Teschke; Sherwood R Casjens
Journal:  J Biol Chem       Date:  2012-08-09       Impact factor: 5.157

Review 2.  Bacteriophage P2.

Authors:  Gail E Christie; Richard Calendar
Journal:  Bacteriophage       Date:  2016-02-18

3.  Structure and size determination of bacteriophage P2 and P4 procapsids: function of size responsiveness mutations.

Authors:  Altaira D Dearborn; Pasi Laurinmaki; Preethi Chandramouli; Cynthia M Rodenburg; Sifang Wang; Sarah J Butcher; Terje Dokland
Journal:  J Struct Biol       Date:  2012-04-09       Impact factor: 2.867

4.  The bacteriophage lambda gpNu3 scaffolding protein is an intrinsically disordered and biologically functional procapsid assembly catalyst.

Authors:  Eva Margarita Medina; Benjamin T Andrews; Eri Nakatani; Carlos Enrique Catalano
Journal:  J Mol Biol       Date:  2011-07-29       Impact factor: 5.469

5.  The Staphylococcus aureus pathogenicity island 1 protein gp6 functions as an internal scaffold during capsid size determination.

Authors:  Altaira D Dearborn; Michael S Spilman; Priyadarshan K Damle; Jenny R Chang; Eric B Monroe; Jamil S Saad; Gail E Christie; Terje Dokland
Journal:  J Mol Biol       Date:  2011-07-29       Impact factor: 5.469

6.  Effects of an early conformational switch defect during ϕX174 morphogenesis are belatedly manifested late in the assembly pathway.

Authors:  Emile B Gordon; Bentley A Fane
Journal:  J Virol       Date:  2012-12-19       Impact factor: 5.103

Review 7.  Bacteriophage protein-protein interactions.

Authors:  Roman Häuser; Sonja Blasche; Terje Dokland; Elisabeth Haggård-Ljungquist; Albrecht von Brunn; Margarita Salas; Sherwood Casjens; Ian Molineux; Peter Uetz
Journal:  Adv Virus Res       Date:  2012       Impact factor: 9.937

8.  Functional domains of the HK97 capsid maturation protease and the mechanisms of protein encapsidation.

Authors:  Robert L Duda; Bonnie Oh; Roger W Hendrix
Journal:  J Mol Biol       Date:  2013-05-17       Impact factor: 5.469

9.  Assembly of bacteriophage 80α capsids in a Staphylococcus aureus expression system.

Authors:  Michael S Spilman; Priyadarshan K Damle; Altaira D Dearborn; Cynthia M Rodenburg; Jenny R Chang; Erin A Wall; Gail E Christie; Terje Dokland
Journal:  Virology       Date:  2012-09-12       Impact factor: 3.616

10.  Assembly of bacteriophage P2 capsids from capsid protein fused to internal scaffolding protein.

Authors:  Jenny R Chang; Michael S Spilman; Terje Dokland
Journal:  Virus Genes       Date:  2010-04       Impact factor: 2.332

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