Literature DB >> 19060205

The chromosome 3p21.3-encoded gene, LIMD1, is a critical tumor suppressor involved in human lung cancer development.

Tyson V Sharp1, Ahmad Al-Attar, Daniel E Foxler, Li Ding, Thomas Q de A Vallim, Yining Zhang, Hala S Nijmeh, Thomas M Webb, Andrew G Nicholson, Qunyuan Zhang, Aldi Kraja, Ian Spendlove, John Osborne, Elaine Mardis, Gregory D Longmore.   

Abstract

Loss of heterozygosity (LOH) and homozygous deletions at chromosome 3p21.3 are common in both small and nonsmall cell lung cancers, indicating the likely presence of tumor suppressor genes (TSGs). Although genetic and epigenetic changes within this region have been identified, the functional significance of these changes has not been explored. Concurrent protein expression and genetic analyses of human lung tumors coupled with functional studies have not been done. Here, we show that expression of the 3p21.3 gene, LIMD1, is frequently down-regulated in human lung tumors. Loss of LIMD1 expression occurs through a combination of gene deletion, LOH, and epigenetic silencing of transcription without evidence for coding region mutations. Experimentally, LIMD1 is a bona fide TSG. Limd1(-/-) mice are predisposed to chemical-induced lung adenocarcinoma and genetic inactivation of Limd1 in mice heterozygous for oncogenic K-Ras(G12D) markedly increased tumor initiation, promotion, and mortality. Thus, we conclude that LIMD1 is a validated chromosome 3p21.3 tumor-suppressor gene involved in human lung cancer development. LIMD1 is a LIM domain containing adapter protein that localizes to E-cadherin cell-cell adhesive junctions, yet also translocates to the nucleus where it has been shown to function as an RB corepressor. As such, LIMD1 has the potential to communicate cell extrinsic or environmental cues with nuclear responses.

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Year:  2008        PMID: 19060205      PMCID: PMC2604919          DOI: 10.1073/pnas.0805003105

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  19 in total

1.  The LIM protein Ajuba is recruited to cadherin-dependent cell junctions through an association with alpha-catenin.

Authors:  Helene Marie; Stephen J Pratt; Martha Betson; Holly Epple; Josef T Kittler; Laura Meek; Stephen J Moss; Sergey Troyanovsky; David Attwell; Gregory D Longmore; Vania M M Braga
Journal:  J Biol Chem       Date:  2002-11-01       Impact factor: 5.157

2.  A novel gene containing LIM domains (LIMD1) is located within the common eliminated region 1 (C3CER1) in 3p21.3.

Authors:  H Kiss; D Kedra; Y Yang; M Kost-Alimova; C Kiss; K P O'Brien; I Fransson; G Klein; S Imreh; J P Dumanski
Journal:  Hum Genet       Date:  1999-12       Impact factor: 4.132

3.  CpG islands in vertebrate genomes.

Authors:  M Gardiner-Garden; M Frommer
Journal:  J Mol Biol       Date:  1987-07-20       Impact factor: 5.469

4.  Loss of p16Ink4a with retention of p19Arf predisposes mice to tumorigenesis.

Authors:  N E Sharpless; N Bardeesy; K H Lee; D Carrasco; D H Castrillon; A J Aguirre; E A Wu; J W Horner; R A DePinho
Journal:  Nature       Date:  2001-09-06       Impact factor: 49.962

5.  Characterizing the cancer genome in lung adenocarcinoma.

Authors:  Barbara A Weir; Michele S Woo; Gad Getz; Sven Perner; Li Ding; Rameen Beroukhim; William M Lin; Michael A Province; Aldi Kraja; Laura A Johnson; Kinjal Shah; Mitsuo Sato; Roman K Thomas; Justine A Barletta; Ingrid B Borecki; Stephen Broderick; Andrew C Chang; Derek Y Chiang; Lucian R Chirieac; Jeonghee Cho; Yoshitaka Fujii; Adi F Gazdar; Thomas Giordano; Heidi Greulich; Megan Hanna; Bruce E Johnson; Mark G Kris; Alex Lash; Ling Lin; Neal Lindeman; Elaine R Mardis; John D McPherson; John D Minna; Margaret B Morgan; Mark Nadel; Mark B Orringer; John R Osborne; Brad Ozenberger; Alex H Ramos; James Robinson; Jack A Roth; Valerie Rusch; Hidefumi Sasaki; Frances Shepherd; Carrie Sougnez; Margaret R Spitz; Ming-Sound Tsao; David Twomey; Roel G W Verhaak; George M Weinstock; David A Wheeler; Wendy Winckler; Akihiko Yoshizawa; Soyoung Yu; Maureen F Zakowski; Qunyuan Zhang; David G Beer; Ignacio I Wistuba; Mark A Watson; Levi A Garraway; Marc Ladanyi; William D Travis; William Pao; Mark A Rubin; Stacey B Gabriel; Richard A Gibbs; Harold E Varmus; Richard K Wilson; Eric S Lander; Matthew Meyerson
Journal:  Nature       Date:  2007-11-04       Impact factor: 49.962

6.  Interstitial deletions including chromosome 3 common eliminated region 1 (C3CER1) prevail in human solid tumors from 10 different tissues.

Authors:  Thorgunnur Eyfjord Petursdottir; Unnur Thorsteinsdottir; Jon Gunnlaugur Jonasson; Pall Helgi Moller; Chen Huiping; Johannes Bjornsson; Valgardur Egilsson; Stefan Imreh; Sigurdur Ingvarsson
Journal:  Genes Chromosomes Cancer       Date:  2004-11       Impact factor: 5.006

Review 7.  Search for unknown tumor-antagonizing genes.

Authors:  Stephan Imreh; George Klein; Eugene R Zabarovsky
Journal:  Genes Chromosomes Cancer       Date:  2003-12       Impact factor: 5.006

8.  Absence of p16INK4 protein is restricted to the subset of lung cancer lines that retains wildtype RB.

Authors:  G A Otterson; R A Kratzke; A Coxon; Y W Kim; F J Kaye
Journal:  Oncogene       Date:  1994-11       Impact factor: 9.867

Review 9.  Tumor suppressor genes on chromosome 3p involved in the pathogenesis of lung and other cancers.

Authors:  Eugene R Zabarovsky; Michael I Lerman; John D Minna
Journal:  Oncogene       Date:  2002-10-07       Impact factor: 9.867

10.  Induction of a high incidence of lung tumors in C57BL/6 mice with multiple ethyl carbamate injections.

Authors:  York E Miller; Lori D Dwyer-Nield; Robert L Keith; Mysan Le; Wilbur A Franklin; Alvin M Malkinson
Journal:  Cancer Lett       Date:  2003-08-20       Impact factor: 8.679

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  23 in total

1.  Loss of heterozygosity and methylation of multiple tumor suppressor genes on chromosome 3 in hepatocellular carcinoma.

Authors:  Xiaoying Zhang; Hiu Ming Li; Zhiyan Liu; Gengyin Zhou; Qinghui Zhang; Tingguo Zhang; Jianping Zhang; Cuijuan Zhang
Journal:  J Gastroenterol       Date:  2012-07-06       Impact factor: 7.527

2.  LIM-domain proteins, LIMD1, Ajuba, and WTIP are required for microRNA-mediated gene silencing.

Authors:  Victoria James; Yining Zhang; Daniel E Foxler; Cornelia H de Moor; Yi Wen Kong; Thomas M Webb; Tim J Self; Yungfeng Feng; Dimitrios Lagos; Chia-Ying Chu; Tariq M Rana; Simon J Morley; Gregory D Longmore; Martin Bushell; Tyson V Sharp
Journal:  Proc Natl Acad Sci U S A       Date:  2010-06-28       Impact factor: 11.205

3.  The LIMD1 protein bridges an association between the prolyl hydroxylases and VHL to repress HIF-1 activity.

Authors:  Daniel E Foxler; Katherine S Bridge; Victoria James; Thomas M Webb; Maureen Mee; Sybil C K Wong; Yunfeng Feng; Dumitru Constantin-Teodosiu; Thorgunnur Eyfjord Petursdottir; Johannes Bjornsson; Sigurdur Ingvarsson; Peter J Ratcliffe; Gregory D Longmore; Tyson V Sharp
Journal:  Nat Cell Biol       Date:  2012-01-29       Impact factor: 28.824

Review 4.  Mechanosensitivity and compositional dynamics of cell-matrix adhesions.

Authors:  Herbert B Schiller; Reinhard Fässler
Journal:  EMBO Rep       Date:  2013-05-17       Impact factor: 8.807

5.  Silencing of LIMD1 promotes proliferation and reverses cell adhesion-mediated drug resistance in non-Hodgkin's lymphoma.

Authors:  Jie Tang; Liqun Zhu; Yuejiao Huang; Bing Shi; Shuqing Zhang; Lingli Gu; Jie Zhao; Minghao Deng; Jiahao Zhu; He Xun; Yuchan Wang; Chun Wang
Journal:  Oncol Lett       Date:  2019-01-11       Impact factor: 2.967

6.  Cloning and characterization of the NPCEDRG gene promoter.

Authors:  Defu Hou; Yongjun Guan; Jianping Liu; Zhefeng Xiao; Yongmei Ouyang; Yanhui Yu; Zhuchu Chen
Journal:  Mol Cell Biochem       Date:  2010-09-07       Impact factor: 3.396

7.  PLOD3 regulates the expression of YAP1 to affect the progression of non-small cell lung cancer via the PKCδ/CDK1/LIMD1 signaling pathway.

Authors:  Wei-Hao Li; Kai Huang; Feng-Biao Wen; Guang-Hui Cui; Hai-Zhou Guo; Song Zhao
Journal:  Lab Invest       Date:  2022-01-17       Impact factor: 5.662

8.  LIMD1 is more frequently altered than RB1 in head and neck squamous cell carcinoma: clinical and prognostic implications.

Authors:  Susmita Ghosh; Amlan Ghosh; Guru P Maiti; Nupur Mukherjee; Sankhadeep Dutta; Anup Roy; Susanta Roychoudhury; Chinmay K Panda
Journal:  Mol Cancer       Date:  2010-03-12       Impact factor: 27.401

9.  Ajuba Phosphorylation by CDK1 Promotes Cell Proliferation and Tumorigenesis.

Authors:  Xingcheng Chen; Seth Stauffer; Yuanhong Chen; Jixin Dong
Journal:  J Biol Chem       Date:  2016-05-18       Impact factor: 5.157

10.  Promoter hypermethylation-induced transcriptional down-regulation of the gene MYCT1 in laryngeal squamous cell carcinoma.

Authors:  Min Yang; Wei Li; Yi-Ying Liu; Shuang Fu; Guang-Bin Qiu; Kai-Lai Sun; Wei-Neng Fu
Journal:  BMC Cancer       Date:  2012-06-06       Impact factor: 4.430

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