Literature DB >> 19056256

Catalysis and substrate selection by histone/protein lysine acetyltransferases.

Christopher E Berndsen1, John M Denu.   

Abstract

Reversible protein acetylation is controlled by the opposing actions of protein pan class="Chemical">lysine acetyltransferases and deacetylations. Recent developments on the structure and biochemical mechanisms of histone acetyltransferases (HATs) have provided new insight into catalysis and substrate selection. Diverse families of HATs appear to perform a conserved mechanism of acetyl transfer, where the lysine-containing substrate directly attacks enzyme-bound acetyl-CoA. The ability of HATs to form distinct multi-subunit complexes provides a means to regulate HAT activity by altering substrate specificity, targeting to specific loci, enhancing acetyltransferase activity, restricting access of non-target proteins, and coordinating the multiple enzyme activities of the complex. In the case of newly discovered Rtt109 HAT, association with distinct histone chaperones directs substrate selection between N-terminal lysines (H3K9, H3K23) and those (H3K56) within the histone fold domain. Moreover, the ability of some HATs to utilize longer chain acyl-CoA (i.e. propionyl-CoA) as alternative substrates suggests a potential direct link between the metabolic state of the cell and transcriptional regulation.

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Year:  2008        PMID: 19056256      PMCID: PMC2723715          DOI: 10.1016/j.sbi.2008.11.004

Source DB:  PubMed          Journal:  Curr Opin Struct Biol        ISSN: 0959-440X            Impact factor:   6.809


  55 in total

1.  Kinetic mechanism of human histone acetyltransferase P/CAF

Authors: 
Journal:  Biochemistry       Date:  2000-12-19       Impact factor: 3.162

Review 2.  The nucleosome: from genomic organization to genomic regulation.

Authors:  Sepideh Khorasanizadeh
Journal:  Cell       Date:  2004-01-23       Impact factor: 41.582

3.  Histone H3-K56 acetylation is catalyzed by histone chaperone-dependent complexes.

Authors:  Toshiaki Tsubota; Christopher E Berndsen; Judith A Erkmann; Corey L Smith; Lanhao Yang; Michael A Freitas; John M Denu; Paul D Kaufman
Journal:  Mol Cell       Date:  2007-02-22       Impact factor: 17.970

4.  Histone chaperone Asf1 is required for histone H3 lysine 56 acetylation, a modification associated with S phase in mitosis and meiosis.

Authors:  J Recht; T Tsubota; J C Tanny; R L Diaz; J M Berger; X Zhang; B A Garcia; J Shabanowitz; A L Burlingame; D F Hunt; P D Kaufman; C D Allis
Journal:  Proc Natl Acad Sci U S A       Date:  2006-04-20       Impact factor: 11.205

Review 5.  Functions of site-specific histone acetylation and deacetylation.

Authors:  Mona D Shahbazian; Michael Grunstein
Journal:  Annu Rev Biochem       Date:  2007       Impact factor: 23.643

6.  The human histone acetyltransferase P/CAF is a promiscuous histone propionyltransferase.

Authors:  Hans Leemhuis; Len C Packman; Karl P Nightingale; Florian Hollfelder
Journal:  Chembiochem       Date:  2008-03-03       Impact factor: 3.164

7.  GCN5-related histone N-acetyltransferases belong to a diverse superfamily that includes the yeast SPT10 protein.

Authors:  A F Neuwald; D Landsman
Journal:  Trends Biochem Sci       Date:  1997-05       Impact factor: 13.807

8.  Yeast enhancer of polycomb defines global Esa1-dependent acetylation of chromatin.

Authors:  Alexandre A Boudreault; Dominique Cronier; William Selleck; Nicolas Lacoste; Rhea T Utley; Stéphane Allard; Julie Savard; William S Lane; Song Tan; Jacques Côté
Journal:  Genes Dev       Date:  2003-06-01       Impact factor: 11.361

9.  Acetylation of lysine 56 of histone H3 catalyzed by RTT109 and regulated by ASF1 is required for replisome integrity.

Authors:  Junhong Han; Hui Zhou; Zhizhong Li; Rui-Ming Xu; Zhiguo Zhang
Journal:  J Biol Chem       Date:  2007-08-09       Impact factor: 5.157

10.  N-lysine propionylation controls the activity of propionyl-CoA synthetase.

Authors:  Jane Garrity; Jeffrey G Gardner; William Hawse; Cynthia Wolberger; Jorge C Escalante-Semerena
Journal:  J Biol Chem       Date:  2007-08-07       Impact factor: 5.157

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  91 in total

1.  Acetylation of core histones in response to HDAC inhibitors is diminished in mitotic HeLa cells.

Authors:  Jason S Patzlaff; Edith Terrenoire; Bryan M Turner; William C Earnshaw; James R Paulson
Journal:  Exp Cell Res       Date:  2010-05-07       Impact factor: 3.905

Review 2.  Histone-modifying enzymes, histone modifications and histone chaperones in nucleosome assembly: Lessons learned from Rtt109 histone acetyltransferases.

Authors:  Jayme L Dahlin; Xiaoyue Chen; Michael A Walters; Zhiguo Zhang
Journal:  Crit Rev Biochem Mol Biol       Date:  2014-11-03       Impact factor: 8.250

3.  The Protein Acetyltransferase PatZ from Escherichia coli Is Regulated by Autoacetylation-induced Oligomerization.

Authors:  Teresa de Diego Puente; Julia Gallego-Jara; Sara Castaño-Cerezo; Vicente Bernal Sánchez; Vanesa Fernández Espín; José García de la Torre; Arturo Manjón Rubio; Manuel Cánovas Díaz
Journal:  J Biol Chem       Date:  2015-08-06       Impact factor: 5.157

4.  Development of histone deacetylase inhibitors as therapeutics for neurological disease.

Authors:  Joel M Gottesfeld; Massimo Pandolfo
Journal:  Future Neurol       Date:  2009-11-01

5.  Human protein N-terminal acetyltransferase hNaa50p (hNAT5/hSAN) follows ordered sequential catalytic mechanism: combined kinetic and NMR study.

Authors:  Rune H Evjenth; Annette K Brenner; Paul R Thompson; Thomas Arnesen; Nils Åge Frøystein; Johan R Lillehaug
Journal:  J Biol Chem       Date:  2012-02-06       Impact factor: 5.157

6.  Chaperone-mediated acetylation of histones by Rtt109 identified by quantitative proteomics.

Authors:  Nebiyu Abshiru; Kevin Ippersiel; Yong Tang; Hua Yuan; Ronen Marmorstein; Alain Verreault; Pierre Thibault
Journal:  J Proteomics       Date:  2012-10-02       Impact factor: 4.044

Review 7.  Regulation, Function, and Detection of Protein Acetylation in Bacteria.

Authors:  Valerie J Carabetta; Ileana M Cristea
Journal:  J Bacteriol       Date:  2017-07-25       Impact factor: 3.490

Review 8.  Enzymatic and nonenzymatic protein acetylations control glycolysis process in liver diseases.

Authors:  Juan Li; Tongxin Wang; Jun Xia; Weilei Yao; Feiruo Huang
Journal:  FASEB J       Date:  2019-08-01       Impact factor: 5.191

9.  Subunit composition and substrate specificity of a MOF-containing histone acetyltransferase distinct from the male-specific lethal (MSL) complex.

Authors:  Yong Cai; Jingji Jin; Selene K Swanson; Michael D Cole; Seung Hyuk Choi; Laurence Florens; Michael P Washburn; Joan W Conaway; Ronald C Conaway
Journal:  J Biol Chem       Date:  2009-12-14       Impact factor: 5.157

10.  Competitive inhibition can linearize dose-response and generate a linear rectifier.

Authors:  Yonatan Savir; Benjamin P Tu; Michael Springer
Journal:  Cell Syst       Date:  2015-09-23       Impact factor: 10.304

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