Literature DB >> 19052377

Crystallization and preliminary X-ray crystallographic analysis of the probable tRNA-modification GTPase (TrmE) from Staphylococcus aureus.

Amit Priyadarshi1, Ki Hyun Nam, Eunice Eunkyeong Kim, Kwang Yeon Hwang.   

Abstract

Probable tRNA-modification GTPase (TrmE) is a guanine nucleotide-binding protein that is conserved between bacteria and humans. GTPase hydrolyzes GTP and plays a pivotal role in signalling pathways. In this study, TrmE from Staphylococcus aureus was overexpressed in Escherichia coli. The enzyme was found to crystallize at 295 K when ammonium sulfate was used as a precipitant. X-ray diffraction data were collected to 2.9 A resolution from the crystallized enzyme using synchrotron radiation. The crystal was found to belong to the cubic space group I23, with unit-cell parameters a = b = c = 229.47 A, alpha = beta = gamma = 90 degrees . The crystal is likely to contain four monomers in the asymmetric unit, with a corresponding V(M) of 2.4 A(3) Da(-1) and a solvent content of 50%.

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Year:  2008        PMID: 19052377      PMCID: PMC2593692          DOI: 10.1107/S1744309108036579

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  9 in total

1.  Characterization of GTPase activity of TrmE, a member of a novel GTPase superfamily, from Thermotoga maritima.

Authors:  K Yamanaka; J Hwang; M Inouye
Journal:  J Bacteriol       Date:  2000-12       Impact factor: 3.490

2.  The structure of the TrmE GTP-binding protein and its implications for tRNA modification.

Authors:  Andrea Scrima; Ingrid R Vetter; M Eugenia Armengod; Alfred Wittinghofer
Journal:  EMBO J       Date:  2004-12-16       Impact factor: 11.598

3.  Solvent content of protein crystals.

Authors:  B W Matthews
Journal:  J Mol Biol       Date:  1968-04-28       Impact factor: 5.469

4.  Dimerisation-dependent GTPase reaction of MnmE: how potassium acts as GTPase-activating element.

Authors:  Andrea Scrima; Alfred Wittinghofer
Journal:  EMBO J       Date:  2006-06-08       Impact factor: 11.598

5.  The Escherichia coli trmE (mnmE) gene, involved in tRNA modification, codes for an evolutionarily conserved GTPase with unusual biochemical properties.

Authors:  H Cabedo; F Macián; M Villarroya; J C Escudero; M Martínez-Vicente; E Knecht; M E Armengod
Journal:  EMBO J       Date:  1999-12-15       Impact factor: 11.598

6.  Effects of mutagenesis in the switch I region and conserved arginines of Escherichia coli MnmE protein, a GTPase involved in tRNA modification.

Authors:  Marta Martínez-Vicente; Lucía Yim; Magda Villarroya; Mara Mellado; Enrique Pérez-Payá; Glenn R Björk; M-Eugenia Armengod
Journal:  J Biol Chem       Date:  2005-06-27       Impact factor: 5.157

7.  The GTPase activity and C-terminal cysteine of the Escherichia coli MnmE protein are essential for its tRNA modifying function.

Authors:  Lucía Yim; Marta Martínez-Vicente; Magdalena Villarroya; Carmen Aguado; Erwin Knecht; María-Eugenia Armengod
Journal:  J Biol Chem       Date:  2003-04-30       Impact factor: 5.157

8.  Complete genomes of two clinical Staphylococcus aureus strains: evidence for the rapid evolution of virulence and drug resistance.

Authors:  Matthew T G Holden; Edward J Feil; Jodi A Lindsay; Sharon J Peacock; Nicholas P J Day; Mark C Enright; Tim J Foster; Catrin E Moore; Laurence Hurst; Rebecca Atkin; Andrew Barron; Nathalie Bason; Stephen D Bentley; Carol Chillingworth; Tracey Chillingworth; Carol Churcher; Louise Clark; Craig Corton; Ann Cronin; Jon Doggett; Linda Dowd; Theresa Feltwell; Zahra Hance; Barbara Harris; Heidi Hauser; Simon Holroyd; Kay Jagels; Keith D James; Nicola Lennard; Alexandra Line; Rebecca Mayes; Sharon Moule; Karen Mungall; Douglas Ormond; Michael A Quail; Ester Rabbinowitsch; Kim Rutherford; Mandy Sanders; Sarah Sharp; Mark Simmonds; Kim Stevens; Sally Whitehead; Bart G Barrell; Brian G Spratt; Julian Parkhill
Journal:  Proc Natl Acad Sci U S A       Date:  2004-06-22       Impact factor: 11.205

9.  Selenomethionyl proteins produced for analysis by multiwavelength anomalous diffraction (MAD): a vehicle for direct determination of three-dimensional structure.

Authors:  W A Hendrickson; J R Horton; D M LeMaster
Journal:  EMBO J       Date:  1990-05       Impact factor: 11.598

  9 in total

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