Literature DB >> 19052366

Cloning, expression, crystallization and preliminary X-ray crystallographic analysis of 3-dehydroquinate synthase, Xoo1243, from Xanthomonas oryzae pv. oryzae.

Phuong-Thuy Ho Ngo1, Sampath Natarajan, Hyesoon Kim, Huynh Kim Hung, Jeong-Gu Kim, Byoung-Moo Lee, Yeh-Jin Ahn, Lin-Woo Kang.   

Abstract

The disease bacterial blight results in serious production losses of rice in Asian countries. The aroB gene encoding dehydroquinate synthase (DHQS), which is a potential antibiotic target, was identified from the plant-pathogenic bacterium Xanthomonas oryzae pv. oryzae (Xoo). DHQS plays an essential role in the synthesis of aromatic compounds in the shikimate pathway. The aroB gene (Xoo1243) was cloned from Xoo and the corresponding DHQS protein was subsequently overexpressed in Escherichia coli. The purified protein was crystallized using the hanging-drop vapour-diffusion method and yielded crystals that diffracted to 2.5 A resolution. The crystals belonged to the tetragonal space group P4(3)2(1)2, with unit-cell parameters a = b = 118.2, c = 98.2 A. According to a Matthews coefficient calculation, the crystal contained two molecules in the asymmetric unit, with a corresponding V(M) of 2.06 A(3) Da(-1) and a solvent content of 40.4%.

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Year:  2008        PMID: 19052366      PMCID: PMC2593707          DOI: 10.1107/S1744309108033575

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  12 in total

1.  THE ENZYMIC CONVERSION OF 3-DEOXY-D-ARABINO-HEPTULOSONIC ACID 7-PHOSPHATE TO 5-DEHYDROQUINATE.

Authors:  P R SRINIVASAN; J ROTHSCHILD; D B SPRINSON
Journal:  J Biol Chem       Date:  1963-10       Impact factor: 5.157

Review 2.  The shikimate pathway--a metabolic tree with many branches.

Authors:  R Bentley
Journal:  Crit Rev Biochem Mol Biol       Date:  1990       Impact factor: 8.250

3.  Solvent content of protein crystals.

Authors:  B W Matthews
Journal:  J Mol Biol       Date:  1968-04-28       Impact factor: 5.469

4.  Cloning and analysis of the aroB gene encoding dehydroquinate synthase from Corynebacterium glutamicum.

Authors:  M A Han; H S Lee; C I Cheon; K H Min; M S Lee
Journal:  Can J Microbiol       Date:  1999-10       Impact factor: 2.419

5.  Salmonella typhimurium aroB mutants are attentuated in BALB/c mice.

Authors:  A Günel-Ozcan; K A Brown; A G Allen; D J Maskell
Journal:  Microb Pathog       Date:  1997-11       Impact factor: 3.738

6.  Characterization and cloning of the gerC locus of Bacillus subtilis 168.

Authors:  M A Yazdi; A Moir
Journal:  J Gen Microbiol       Date:  1990-07

7.  Dehydroquinate synthase from Escherichia coli: purification, cloning, and construction of overproducers of the enzyme.

Authors:  J W Frost; J L Bender; J T Kadonaga; J R Knowles
Journal:  Biochemistry       Date:  1984-09-11       Impact factor: 3.162

8.  The common aromatic amino acid biosynthesis pathway is essential in Mycobacterium tuberculosis.

Authors:  Tanya Parish; Neil G Stoker
Journal:  Microbiology       Date:  2002-10       Impact factor: 2.777

9.  Comparison of ligand-induced conformational changes and domain closure mechanisms, between prokaryotic and eukaryotic dehydroquinate synthases.

Authors:  C E Nichols; J Ren; K Leslie; B Dhaliwal; M Lockyer; I Charles; A R Hawkins; D K Stammers
Journal:  J Mol Biol       Date:  2004-10-22       Impact factor: 5.469

10.  Functional characterization by genetic complementation of aroB-encoded dehydroquinate synthase from Mycobacterium tuberculosis H37Rv and its heterologous expression and purification.

Authors:  Jordana Dutra de Mendonça; Fernanda Ely; Mario Sergio Palma; Jeverson Frazzon; Luiz Augusto Basso; Diógenes Santiago Santos
Journal:  J Bacteriol       Date:  2007-06-22       Impact factor: 3.490

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  1 in total

1.  Expression, Purification, and Characterisation of Dehydroquinate Synthase from Pyrococcus furiosus.

Authors:  Leonardo Negron; Mark L Patchett; Emily J Parker
Journal:  Enzyme Res       Date:  2011-04-05
  1 in total

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