Literature DB >> 19049388

Probing the recognition properties of the antiparallel coiled coil motif from PKN by protein grafting.

Yinyin Li1, Harmeet Kaur, Martha G Oakley.   

Abstract

Coiled coils have long been recognized as the major constituent of many fibrous proteins and also serve as oligomerization domains in a wide variety of proteins. More recently, it has become clear that the surfaces of two-stranded coiled coils are also involved in macromolecular recognition. Indeed, the helical hairpin or intramolecular antiparallel coiled coil (ACC) can serve as a protein or nucleic acid recognition motif. Protein kinase N (PKN) interacts with the small GTPase RhoA through ACC motifs. The crystal structure of RhoA with the N-terminal ACC motif (PKN-ACC1) is unusual in that these proteins interact through two distinct surfaces. Using the ACC domain of seryl tRNA synthetase (SRS-ACC) as a scaffold for protein grafting experiments, we show that RhoA interacts with only one face of PKN-ACC1. This result highlights the potential of the SRS-ACC scaffold for protein engineering applications and provides insight into the mechanism of RhoA-mediated signal transduction through PKN.

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Year:  2008        PMID: 19049388     DOI: 10.1021/bi8017448

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  3 in total

1.  A set of computationally designed orthogonal antiparallel homodimers that expands the synthetic coiled-coil toolkit.

Authors:  Christopher Negron; Amy E Keating
Journal:  J Am Chem Soc       Date:  2014-11-13       Impact factor: 15.419

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Authors:  Nikos Pinotsis; Gabriel Waksman
Journal:  J Biol Chem       Date:  2017-04-07       Impact factor: 5.157

3.  Computational design of high-affinity epitope scaffolds by backbone grafting of a linear epitope.

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Journal:  J Mol Biol       Date:  2011-10-31       Impact factor: 5.469

  3 in total

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