Literature DB >> 19048497

Transferability of SSR markers from related Uredinales species to the coffee rust Hemileia vastatrix.

M Cristancho1, C Escobar.   

Abstract

The aim of the present research was to test the transferability of simple sequence repeat (SSR) markers developed in two Uredinales species to Hemileia vastatrix, coffee rust. The development of efficient techniques for the identification of H. vastatrix isolates is imperative, given the continuous development of new races. The transferability of 25 SSR markers developed in the related Uredinales species Puccinia coronata f. sp lolli and Melampsora linii to H. vastatrix was tested. A low level of transferability of SSRs was detected, and only 4 potential markers that can be used to fingerprint the coffee rust races were identified.

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Year:  2008        PMID： 19048497     DOI： 10.4238/vol7-4gmr493

Source DB:  PubMed          Journal:  Genet Mol Res        ISSN： 1676-5680


  5 in total

1.  Variability of United States isolates of Macrophomina phaseolina based on simple sequence repeats and cross genus transferability to related genera within botryosphaeriaceae.

Authors:  Richard E Baird; Phillip A Wadl; Thomas Allen; David McNeill; Xinwang Wang; John K Moulton; Timothy A Rinehart; Hamed K Abbas; Thomas Shier; Robert N Trigiano
Journal:  Mycopathologia       Date:  2010-03-30       Impact factor: 2.574

2.  Identification and characterization of microsatellite from Alternaria brassicicola to assess cross-species transferability and utility as a diagnostic marker.

Authors:  Ruchi Singh; Sudheer Kumar; Prem Lal Kashyap; Alok Kumar Srivastava; Sanjay Mishra; Arun Kumar Sharma
Journal:  Mol Biotechnol       Date:  2014-11       Impact factor: 2.695

3.  Population structure and genetic relationships between Ethiopian and Brazilian Coffea arabica genotypes revealed by SSR markers.

Authors:  Bruna Silvestre Rodrigues da Silva; Gustavo César Sant'Ana; Camila Lucas Chaves; Leonardo Godoy Androcioli; Rafaelle Vecchia Ferreira; Gustavo Hiroshi Sera; Pierre Charmetant; Thierry Leroy; David Pot; Douglas Silva Domingues; Luiz Filipe Protasio Pereira
Journal:  Genetica       Date:  2019-05-03       Impact factor: 1.082

Review 4.  Computational biology in Colombia.

Authors:  Silvia Restrepo; Andrés Pinzón; Luis Miguel Rodríguez-R; Roberto Sierra; Alejandro Grajales; Adriana Bernal; Emiliano Barreto; Pedro A Moreno; Pedro Moreno; Maria Mercedes Zambrano; Marco Cristancho; Andrés González; Harold Castro
Journal:  PLoS Comput Biol       Date:  2009-10-30       Impact factor: 4.475

5.  Diversity and specificity of microsatellites within Aspergillus section Fumigati.

Authors:  Ricardo Araujo; António Amorim; Leonor Gusmão
Journal:  BMC Microbiol       Date:  2012-07-28       Impact factor: 3.605
  5 in total

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