Literature DB >> 19044852

A simple patchy colloid model for the phase behavior of lysozyme dispersions.

Christoph Gögelein1, Gerhard Nägele, Remco Tuinier, Thomas Gibaud, Anna Stradner, Peter Schurtenberger.   

Abstract

We propose a minimal model for spherical proteins with aeolotopic pair interactions to describe the equilibrium phase behavior of lysozyme. The repulsive screened Coulomb interactions between the particles are taken into account assuming that the net charges are smeared out homogeneously over the spherical protein surfaces. We incorporate attractive surface patches, with the interactions between patches on different spheres modeled by an attractive Yukawa potential. The parameters entering the attractive Yukawa potential part are determined using information on the experimentally accessed gas-liquid-like critical point. The Helmholtz free energy of the fluid and solid phases is calculated using second-order thermodynamic perturbation theory. Our predictions for the solubility curve are in fair agreement with experimental data. In addition, we present new experimental data for the gas-liquid coexistence curves at various salt concentrations and compare these with our model calculations. In agreement with earlier findings, we observe that the strength and the range of the attractive potential part only weakly depend on the salt content.

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Year:  2008        PMID: 19044852     DOI: 10.1063/1.2951987

Source DB:  PubMed          Journal:  J Chem Phys        ISSN: 0021-9606            Impact factor:   3.488


  19 in total

1.  Protein aggregation in salt solutions.

Authors:  Miha Kastelic; Yurij V Kalyuzhnyi; Barbara Hribar-Lee; Ken A Dill; Vojko Vlachy
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2.  Fast Method for Computing Chemical Potentials and Liquid-Liquid Phase Equilibria of Macromolecular Solutions.

Authors:  Sanbo Qin; Huan-Xiang Zhou
Journal:  J Phys Chem B       Date:  2016-07-05       Impact factor: 2.991

3.  How to simulate patchy particles.

Authors:  Lorenzo Rovigatti; John Russo; Flavio Romano
Journal:  Eur Phys J E Soft Matter       Date:  2018-05-14       Impact factor: 1.890

Review 4.  Protein folding, binding, and droplet formation in cell-like conditions.

Authors:  Sanbo Qin; Huan-Xiang Zhou
Journal:  Curr Opin Struct Biol       Date:  2016-10-20       Impact factor: 6.809

5.  Coupling of isotropic and directional interactions and its effect on phase separation and self-assembly.

Authors:  Debra J Audus; Francis W Starr; Jack F Douglas
Journal:  J Chem Phys       Date:  2016-02-21       Impact factor: 3.488

6.  Characterizing protein crystal contacts and their role in crystallization: rubredoxin as a case study.

Authors:  Diana Fusco; Jeffrey J Headd; Alfonso De Simone; Jun Wang; Patrick Charbonneau
Journal:  Soft Matter       Date:  2014-01-14       Impact factor: 3.679

7.  Eye patches: Protein assembly of index-gradient squid lenses.

Authors:  J Cai; J P Townsend; T C Dodson; P A Heiney; A M Sweeney
Journal:  Science       Date:  2017-08-11       Impact factor: 47.728

8.  Modeling phase transitions in mixtures of β-γ lens crystallins.

Authors:  Miha Kastelic; Yurij V Kalyuzhnyi; Vojko Vlachy
Journal:  Soft Matter       Date:  2016-08-15       Impact factor: 3.679

9.  Valence, loop formation and universality in self-assembling patchy particles.

Authors:  Debra J Audus; Francis W Starr; Jack F Douglas
Journal:  Soft Matter       Date:  2018-02-28       Impact factor: 3.679

Review 10.  The "Sticky Patch" Model of Crystallization and Modification of Proteins for Enhanced Crystallizability.

Authors:  Zygmunt S Derewenda; Adam Godzik
Journal:  Methods Mol Biol       Date:  2017
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