Literature DB >> 19039618

[Mathematical modelling in systems biology. Simulation of the desmoplastic stromal reaction as an example].

A Groh1, A K Louis, F Weichert, T Richards, M Wagner.   

Abstract

A mathematical model of collagen fiber mesh formation was created to evaluate the possible role of chemotaxis and haptotaxis in the histomorphology of a desmoplastic stromal reaction (DSR). Fibroblasts were mathematicaly interpreted as mobile discrete objects, characterized by their velocity and position, both dependent on time. This resulted in cell migration paths, commonly termed "trajectories" which are modulated as stochastic process. The implementation of chemotactic effects requires knowledge of the concentration and distribution of the appropriate chemical substance in the scenario. A simplistic model assumption allows the calculation of a numerical solution of the resulting diffusion equation. Adding haptotaxis necessitates the simulation of the extracellular matrix (ECM). The fiber distribution is modeled as a vector field which contains information on both, fiber density and direction. The production of new fibers is based on ordinary differential equations coupled with the migratory behavior of the cells. Filters help smooth the trajectories. Appropriate visualization allows a direct comparison of the simulation results with histomorphology. Matches between computed data and their real counterparts indicate that the development of mathematical models is appropriate to describe and forecast the course of DSR. This makes systems biology a stepping stone to improving biomedical research.

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Year:  2008        PMID: 19039618     DOI: 10.1007/s00292-008-1023-1

Source DB:  PubMed          Journal:  Pathologe        ISSN: 0172-8113            Impact factor:   1.011


  9 in total

1.  Mathematical modelling of extracellular matrix dynamics using discrete cells: fiber orientation and tissue regeneration.

Authors:  J C Dallon; J A Sherratt; P K Maini
Journal:  J Theor Biol       Date:  1999-08-21       Impact factor: 2.691

2.  Stochastic models for cell motion and taxis.

Authors:  Edward L Ionides; Kathy S Fang; R Rivkah Isseroff; George F Oster
Journal:  J Math Biol       Date:  2003-08-06       Impact factor: 2.259

Review 3.  The stroma reaction myofibroblast: a key player in the control of tumor cell behavior.

Authors:  Alexis Desmoulière; Christelle Guyot; Giulio Gabbiani
Journal:  Int J Dev Biol       Date:  2004       Impact factor: 2.203

Review 4.  Extracellular matrix.

Authors:  J Labat-Robert; M Bihari-Varga; L Robert
Journal:  FEBS Lett       Date:  1990-08-01       Impact factor: 4.124

5.  Multiphase mechanics of capsule formation in tumors.

Authors:  S R Lubkin; T Jackson
Journal:  J Biomech Eng       Date:  2002-04       Impact factor: 2.097

6.  A stochastic model for adhesion-mediated cell random motility and haptotaxis.

Authors:  R B Dickinson; R T Tranquillo
Journal:  J Math Biol       Date:  1993       Impact factor: 2.259

7.  Comparison of the degree of contact guidance between tumor cells and normal cells in vitro.

Authors:  M D McCartney; R C Buck
Journal:  Cancer Res       Date:  1981-08       Impact factor: 12.701

8.  Evaluation of two 3D virtual computer reconstructions for comparison of cleft lip and palate to normal fetal microanatomy.

Authors:  Constantin A Landes; Frank Weichert; Philipp Geis; Fritsch Helga; Mathias Wagner
Journal:  Anat Rec A Discov Mol Cell Evol Biol       Date:  2006-03

9.  Migration of individual microvessel endothelial cells: stochastic model and parameter measurement.

Authors:  C L Stokes; D A Lauffenburger; S K Williams
Journal:  J Cell Sci       Date:  1991-06       Impact factor: 5.285

  9 in total

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