Literature DB >> 19031897

Isolation and characterization of the gene associated with geosmin production in cyanobacteria.

Steven Giglio1, Jiaoyang Jiang, Christopher P Saint, David E Cane, Paul T Monis.   

Abstract

Geosmin is a secondary metabolite responsible for earthy tastes and odors in potable water supplies. Geosmin continues to be a challenge to water utility management regimes and remains one of the most common causes of consumer complaints, as the taste of "dirty" water may suggest a failed disinfection regime and that the water may be unsafe to drink. Although cyanobacteria have been reported to be largely responsible for these taste and odor events, the answer as to how or why geosmin is produced has eluded researchers. We describe here for the first time the mechanism by which geosmin is produced in a model cyanobacterium, Nostoc punctiforme PCC 73102 (ATCC 29133), which we demonstrate utilizes a single enzyme to catalyze the cyclization of farnesyl diphosphate to geosmin. Using this information, we have developed a PCR-based assay that allows the rapid detection of geosmin-producing cyanobacteria. This test may be utilized to confirm and track the emergence of taste and odor-producing cyanobacteria in any given water body and thus can be used as an early warning system by managers of water bodies that may suffer from adverse taste and odor episodes.

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Year:  2008        PMID: 19031897      PMCID: PMC2746953          DOI: 10.1021/es801465w

Source DB:  PubMed          Journal:  Environ Sci Technol        ISSN: 0013-936X            Impact factor:   9.028


  21 in total

Review 1.  Toxins of cyanobacteria.

Authors:  Marian E van Apeldoorn; Hans P van Egmond; Gerrit J A Speijers; Guido J I Bakker
Journal:  Mol Nutr Food Res       Date:  2007-01       Impact factor: 5.914

2.  Identification of (8S,9S,10S)-8,10-dimethyl-1-octalin, a key intermediate in the biosynthesis of geosmin in bacteria.

Authors:  Thorben Nawrath; Jeroen S Dickschat; Rolf Müller; Jiaoyang Jiang; David E Cane; Stefan Schulz
Journal:  J Am Chem Soc       Date:  2007-12-21       Impact factor: 15.419

3.  Identification and expression analyses of putative sesquiterpene synthase genes in Phormidium sp. and prevalence of geoA-like genes in a drinking water reservoir.

Authors:  Frank Ludwig; Anja Medger; Hilmar Börnick; Michael Opitz; Kathrin Lang; Michael Göttfert; Isolde Röske
Journal:  Appl Environ Microbiol       Date:  2007-09-07       Impact factor: 4.792

4.  The application of powdered activated carbon for MIB and geosmin removal: predicting PAC doses in four raw waters.

Authors:  D Cook; G Newcombe; P Sztajnbok
Journal:  Water Res       Date:  2001-04       Impact factor: 11.236

5.  Geosmin biosynthesis in Streptomyces avermitilis. Molecular cloning, expression, and mechanistic study of the germacradienol/geosmin synthase.

Authors:  David E Cane; Xiaofei He; Seiji Kobayashi; Satoshi Omura; Haruo Ikeda
Journal:  J Antibiot (Tokyo)       Date:  2006-08       Impact factor: 2.649

6.  Identification and functional analysis of genes controlling biosynthesis of 2-methylisoborneol.

Authors:  Mamoru Komatsu; Muneya Tsuda; Satoshi Omura; Hideaki Oikawa; Haruo Ikeda
Journal:  Proc Natl Acad Sci U S A       Date:  2008-05-20       Impact factor: 11.205

7.  Development and field testing of a real-time PCR assay for cylindrospermopsin-producing cyanobacteria.

Authors:  J P Rasmussen; S Giglio; P T Monis; R J Campbell; C P Saint
Journal:  J Appl Microbiol       Date:  2007-12-20       Impact factor: 3.772

8.  PCR-targeted Streptomyces gene replacement identifies a protein domain needed for biosynthesis of the sesquiterpene soil odor geosmin.

Authors:  Bertolt Gust; Greg L Challis; Kay Fowler; Tobias Kieser; Keith F Chater
Journal:  Proc Natl Acad Sci U S A       Date:  2003-01-31       Impact factor: 11.205

9.  Cyanobacteria toxins in the Salton Sea.

Authors:  Wayne W Carmichael; RenHui Li
Journal:  Saline Systems       Date:  2006-04-19

10.  Use of DNA melting simulation software for in silico diagnostic assay design: targeting regions with complex melting curves and confirmation by real-time PCR using intercalating dyes.

Authors:  John P Rasmussen; Christopher P Saint; Paul T Monis
Journal:  BMC Bioinformatics       Date:  2007-03-29       Impact factor: 3.169

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  22 in total

Review 1.  Exploration and mining of the bacterial terpenome.

Authors:  David E Cane; Haruo Ikeda
Journal:  Acc Chem Res       Date:  2011-10-31       Impact factor: 22.384

2.  Biosynthesis of 2-methylisoborneol in cyanobacteria.

Authors:  S Giglio; W K W Chou; H Ikeda; D E Cane; P T Monis
Journal:  Environ Sci Technol       Date:  2010-12-21       Impact factor: 9.028

3.  Characterization of a novel sesquiterpene cyclase involved in (+)-caryolan-1-ol biosynthesis in Streptomyces griseus.

Authors:  Chiaki Nakano; Sueharu Horinouchi; Yasuo Ohnishi
Journal:  J Biol Chem       Date:  2011-06-21       Impact factor: 5.157

4.  Cyanobacterial Genome Sequencing, Annotation, and Bioinformatics.

Authors:  Jonna Teikari; Martin Baunach; Elke Dittmann
Journal:  Methods Mol Biol       Date:  2022

5.  Elucidation of Taste- and Odor-Producing Bacteria and Toxigenic Cyanobacteria in a Midwestern Drinking Water Supply Reservoir by Shotgun Metagenomic Analysis.

Authors:  Timothy G Otten; Jennifer L Graham; Theodore D Harris; Theo W Dreher
Journal:  Appl Environ Microbiol       Date:  2016-08-15       Impact factor: 4.792

6.  Diversity of sesquiterpene synthases in the basidiomycete Coprinus cinereus.

Authors:  Sean Agger; Fernando Lopez-Gallego; Claudia Schmidt-Dannert
Journal:  Mol Microbiol       Date:  2009-04-28       Impact factor: 3.501

7.  Whole-Genome Sequencing of Corallococcus sp. Strain EGB Reveals the Genetic Determinants Linking Taxonomy and Predatory Behavior.

Authors:  Yuqiang Zhao; Yanxin Wang; Chengyao Xia; Xu Li; Xianfeng Ye; Qiwen Fan; Yan Huang; Zhoukun Li; Cancan Zhu; Zhongli Cui
Journal:  Genes (Basel)       Date:  2021-09-15       Impact factor: 4.096

8.  Genes associated with 2-methylisoborneol biosynthesis in cyanobacteria: isolation, characterization, and expression in response to light.

Authors:  Zhongjie Wang; Yao Xu; Jihai Shao; Jie Wang; Renhui Li
Journal:  PLoS One       Date:  2011-04-07       Impact factor: 3.240

Review 9.  Terpenoids and their biosynthesis in cyanobacteria.

Authors:  Bagmi Pattanaik; Pia Lindberg
Journal:  Life (Basel)       Date:  2015-01-21

10.  Genome mining for natural product biosynthetic gene clusters in the Subsection V cyanobacteria.

Authors:  Melinda L Micallef; Paul M D'Agostino; Deepti Sharma; Rajesh Viswanathan; Michelle C Moffitt
Journal:  BMC Genomics       Date:  2015-09-03       Impact factor: 3.969

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