Literature DB >> 19030904

Multimodal encoding in a simplified model of intracellular calcium signaling.

Maurizio De Pittà1, Vladislav Volman, Herbert Levine, Eshel Ben-Jacob.   

Abstract

Many cells use calcium signaling to carry information from the extracellular side of the plasma membrane to targets in their interior. Since virtually all cells employ a network of biochemical reactions for Ca(2+) signaling, much effort has been devoted to understand the functional role of Ca(2+) responses and to decipher how their complex dynamics is regulated by the biochemical network of Ca(2+)-related signal transduction pathways. Experimental observations show that Ca(2+) signals in response to external stimuli encode information via frequency modulation (FM) or alternatively via amplitude modulation (AM). Although minimal models can capture separately both types of dynamics, they fail to exhibit different and more advanced encoding modes. By arguments of bifurcation theory, we propose instead that under some biophysical conditions more complex modes of information encoding can also be manifested by minimal models. We consider the minimal model of Li and Rinzel and show that information encoding can occur by AM of Ca(2+) oscillations, by FM or by both modes (AFM). Our work is motivated by calcium signaling in astrocytes, the predominant type of cortical glial cells that is nowadays recognized to play a crucial role in the regulation of neuronal activity and information processing of the brain. We explain that our results can be crucial for a better understanding of synaptic information transfer. Furthermore, our results might also be important for better insight on other examples of physiological processes regulated by Ca(2+) signaling.

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Year:  2008        PMID: 19030904     DOI: 10.1007/s10339-008-0242-y

Source DB:  PubMed          Journal:  Cogn Process        ISSN: 1612-4782


  41 in total

1.  Selection of intracellular calcium patterns in a model with clustered Ca2+ release channels.

Authors:  J W Shuai; P Jung
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2003-03-13

Review 2.  CaM kinase II as frequency decoder of Ca2+ oscillations.

Authors:  G Dupont; A Goldbeter
Journal:  Bioessays       Date:  1998-08       Impact factor: 4.345

3.  Equations for InsP3 receptor-mediated [Ca2+]i oscillations derived from a detailed kinetic model: a Hodgkin-Huxley like formalism.

Authors:  Y X Li; J Rinzel
Journal:  J Theor Biol       Date:  1994-02-21       Impact factor: 2.691

4.  Hippocampal astrocytes in situ respond to glutamate released from synaptic terminals.

Authors:  J T Porter; K D McCarthy
Journal:  J Neurosci       Date:  1996-08-15       Impact factor: 6.167

5.  Intracellular calcium oscillations in astrocytes: a highly plastic, bidirectional form of communication between neurons and astrocytes in situ.

Authors:  L Pasti; A Volterra; T Pozzan; G Carmignoto
Journal:  J Neurosci       Date:  1997-10-15       Impact factor: 6.167

6.  Simulations of inositol phosphate metabolism and its interaction with InsP(3)-mediated calcium release.

Authors:  Jyoti Mishra; Upinder S Bhalla
Journal:  Biophys J       Date:  2002-09       Impact factor: 4.033

7.  Spontaneous oscillations of dressed neurons: a new mechanism for epilepsy?

Authors:  Suhita Nadkarni; Peter Jung
Journal:  Phys Rev Lett       Date:  2003-12-24       Impact factor: 9.161

8.  Concurrent encoding of frequency and amplitude modulation in human auditory cortex: MEG evidence.

Authors:  Huan Luo; Yadong Wang; David Poeppel; Jonathan Z Simon
Journal:  J Neurophysiol       Date:  2006-03-01       Impact factor: 2.714

Review 9.  Temporal and spatial heterogeneities of Ca2+ signaling: mechanisms and physiological roles.

Authors:  E C Toescu
Journal:  Am J Physiol       Date:  1995-08

10.  Astrocytes optimize the synaptic transmission of information.

Authors:  Suhita Nadkarni; Peter Jung; Herbert Levine
Journal:  PLoS Comput Biol       Date:  2008-05-30       Impact factor: 4.475

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  15 in total

1.  The influence of the astrocyte field on neuronal dynamics and synchronization.

Authors:  Paolo Allegrini; Leone Fronzoni; Davide Pirino
Journal:  J Biol Phys       Date:  2009-06-04       Impact factor: 1.365

Review 2.  Improved tools to study astrocytes.

Authors:  Xinzhu Yu; Jun Nagai; Baljit S Khakh
Journal:  Nat Rev Neurosci       Date:  2020-02-10       Impact factor: 34.870

3.  Glutamate regulation of calcium and IP3 oscillating and pulsating dynamics in astrocytes.

Authors:  Maurizio De Pittà; Mati Goldberg; Vladislav Volman; Hugues Berry; Eshel Ben-Jacob
Journal:  J Biol Phys       Date:  2009-06-12       Impact factor: 1.365

4.  Nonlinear gap junctions enable long-distance propagation of pulsating calcium waves in astrocyte networks.

Authors:  Mati Goldberg; Maurizio De Pittà; Vladislav Volman; Hugues Berry; Eshel Ben-Jacob
Journal:  PLoS Comput Biol       Date:  2010-08-26       Impact factor: 4.475

5.  Self-repair in a bidirectionally coupled astrocyte-neuron (AN) system based on retrograde signaling.

Authors:  John Wade; Liam McDaid; Jim Harkin; Vincenzo Crunelli; Scott Kelso
Journal:  Front Comput Neurosci       Date:  2012-09-26       Impact factor: 2.380

6.  A tale of two stories: astrocyte regulation of synaptic depression and facilitation.

Authors:  Maurizio De Pittà; Vladislav Volman; Hugues Berry; Eshel Ben-Jacob
Journal:  PLoS Comput Biol       Date:  2011-12-01       Impact factor: 4.475

7.  Bidirectional coupling between astrocytes and neurons mediates learning and dynamic coordination in the brain: a multiple modeling approach.

Authors:  John J Wade; Liam J McDaid; Jim Harkin; Vincenzo Crunelli; J A Scott Kelso
Journal:  PLoS One       Date:  2011-12-29       Impact factor: 3.240

8.  Ciliates learn to diagnose and correct classical error syndromes in mating strategies.

Authors:  Kevin B Clark
Journal:  Front Microbiol       Date:  2013-08-19       Impact factor: 5.640

9.  Basis for a neuronal version of Grover's quantum algorithm.

Authors:  Kevin B Clark
Journal:  Front Mol Neurosci       Date:  2014-04-17       Impact factor: 5.639

10.  Computational quest for understanding the role of astrocyte signaling in synaptic transmission and plasticity.

Authors:  Maurizio De Pittà; Vladislav Volman; Hugues Berry; Vladimir Parpura; Andrea Volterra; Eshel Ben-Jacob
Journal:  Front Comput Neurosci       Date:  2012-12-21       Impact factor: 2.380

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