Literature DB >> 19025561

Identification of host receptor and receptor-binding module of a newly sequenced T5-like phage EPS7.

Junwoo Hong1, Kwang-Pyo Kim, Sunggi Heu, Sang Jun Lee, Sankar Adhya, Sangryeol Ryu.   

Abstract

The virulent bacteriophage EPS7 active against a number of Salmonella serovar and Escherichia coli strains, isolated from the local sewage in Korea, belongs to the family Siphoviridae. The ESP7 genome constitutes a linear double-stranded DNA of 111 382 bp. DNA sequencing and genomic analysis of EPS7 showed that it belongs to the phage T5 family. We identified the EPS7 genes involved in DNA repair, replication, viral structure and bacterial lysis by comparing the EPS7 genome with that of T5. In contrast, the tail genes encoding for putative host receptor-binding protein and the putative receptor-blocking lipoprotein precursor of EPS7 exhibit high homologies with the corresponding gene products of BF23, another member of the T5-family. BF23 binds to BtuB, a surface receptor in the host and involved in vitamin B12 uptake, but its infection is independent of TonB. By constructing a series of deletion mutants in Salmonella and in E. coli and studying phage infection in the mutant hosts, we showed that BtuB is also the host receptor of the phage EPS7. Whether EPS7 infection depends on TonB needs to be further studied.

Entities:  

Mesh:

Substances:

Year:  2008        PMID: 19025561      PMCID: PMC9021807          DOI: 10.1111/j.1574-6968.2008.01397.x

Source DB:  PubMed          Journal:  FEMS Microbiol Lett        ISSN: 0378-1097            Impact factor:   2.820


  33 in total

1.  The DNA region of phage BF23 encoding receptor binding protein and receptor blocking lipoprotein lacks homology to the corresponding region of closely related phage T5.

Authors:  Martin Mondigler; Ahmed T Ayoub; Knut J Heller
Journal:  J Basic Microbiol       Date:  2006       Impact factor: 2.281

Review 2.  Gapped BLAST and PSI-BLAST: a new generation of protein database search programs.

Authors:  S F Altschul; T L Madden; A A Schäffer; J Zhang; Z Zhang; W Miller; D J Lipman
Journal:  Nucleic Acids Res       Date:  1997-09-01       Impact factor: 16.971

3.  Bacteriophage T5-induced endonucleases that introduce site-specific single-chain interruptions in duplex DNA.

Authors:  S G Rogers; M Rhoades
Journal:  Proc Natl Acad Sci U S A       Date:  1976-05       Impact factor: 11.205

4.  Identification of the phage gene for host receptor specificity by analyzing hybrid phages of T5 and BF23.

Authors:  K J Heller
Journal:  Virology       Date:  1984-11       Impact factor: 3.616

5.  Nucleotide sequence of the gene for the vitamin B12 receptor protein in the outer membrane of Escherichia coli.

Authors:  K Heller; R J Kadner
Journal:  J Bacteriol       Date:  1985-03       Impact factor: 3.490

6.  Isolation of high-density mutants and identification of nonessential structural proteins in bacteriophage T5; dispensability of L-shaped tail fibers and a secondary major head protein.

Authors:  K Saigo
Journal:  Virology       Date:  1978-04       Impact factor: 3.616

7.  Polymannose O-antigens of Escherichia coli, the binding sites for the reversible adsorption of bacteriophage T5+ via the L-shaped tail fibers.

Authors:  K Heller; V Braun
Journal:  J Virol       Date:  1982-01       Impact factor: 5.103

8.  Accelerated adsorption of bacteriophage T5 to Escherichia coli F, resulting from reversible tail fiber-lipopolysaccharide binding.

Authors:  K Heller; V Braun
Journal:  J Bacteriol       Date:  1979-07       Impact factor: 3.490

9.  Inactivation in vitro of the Escherichia coli outer membrane protein FhuA by a phage T5-encoded lipoprotein.

Authors:  I Pedruzzi; J P Rosenbusch; K P Locher
Journal:  FEMS Microbiol Lett       Date:  1998-11-01       Impact factor: 2.742

10.  FepA- and TonB-dependent bacteriophage H8: receptor binding and genomic sequence.

Authors:  Wolfgang Rabsch; Li Ma; Graham Wiley; Fares Z Najar; Wallace Kaserer; Daniel W Schuerch; Joseph E Klebba; Bruce A Roe; Jenny A Laverde Gomez; Marcus Schallmey; Salete M C Newton; Phillip E Klebba
Journal:  J Bacteriol       Date:  2007-05-25       Impact factor: 3.490

View more
  23 in total

1.  Development of phoH as a novel signature gene for assessing marine phage diversity.

Authors:  Dawn B Goldsmith; Giuseppe Crosti; Bhakti Dwivedi; Lauren D McDaniel; Arvind Varsani; Curtis A Suttle; Markus G Weinbauer; Ruth-Anne Sandaa; Mya Breitbart
Journal:  Appl Environ Microbiol       Date:  2011-09-16       Impact factor: 4.792

2.  Orthologous gene clusters and taxon signature genes for viruses of prokaryotes.

Authors:  David M Kristensen; Alison S Waller; Takuji Yamada; Peer Bork; Arcady R Mushegian; Eugene V Koonin
Journal:  J Bacteriol       Date:  2012-12-07       Impact factor: 3.490

3.  Complete genome sequence of a novel marine siphovirus, pVp-1, infecting Vibrio parahaemolyticus.

Authors:  Ji Hyung Kim; Jin Woo Jun; Casiano H Choresca; Sang Phil Shin; Jee Eun Han; Se Chang Park
Journal:  J Virol       Date:  2012-06       Impact factor: 5.103

4.  Complete genome sequence of Pectobacterium carotovorum subsp. carotovorum bacteriophage My1.

Authors:  Dong Hwan Lee; Ju-Hoon Lee; Hakdong Shin; Samnyu Ji; Eunjung Roh; Kyusuk Jung; Sangryeol Ryu; Jaehyuk Choi; Sunggi Heu
Journal:  J Virol       Date:  2012-10       Impact factor: 5.103

5.  Identification and characterization of a novel flagellum-dependent Salmonella-infecting bacteriophage, iEPS5.

Authors:  Younho Choi; Hakdong Shin; Ju-Hoon Lee; Sangryeol Ryu
Journal:  Appl Environ Microbiol       Date:  2013-06-07       Impact factor: 4.792

6.  Characterization of a T5-like coliphage, SPC35, and differential development of resistance to SPC35 in Salmonella enterica serovar typhimurium and Escherichia coli.

Authors:  Minsik Kim; Sangryeol Ryu
Journal:  Appl Environ Microbiol       Date:  2011-01-21       Impact factor: 4.792

7.  Characterization and comparative genomic analysis of a novel bacteriophage, SFP10, simultaneously inhibiting both Salmonella enterica and Escherichia coli O157:H7.

Authors:  Minjung Park; Ju-Hoon Lee; Hakdong Shin; Minsik Kim; Jeongjoon Choi; Dong-Hyun Kang; Sunggi Heu; Sangryeol Ryu
Journal:  Appl Environ Microbiol       Date:  2011-10-21       Impact factor: 4.792

8.  The use of genomic signature distance between bacteriophages and their hosts displays evolutionary relationships and phage growth cycle determination.

Authors:  Patrick Deschavanne; Michael S DuBow; Christophe Regeard
Journal:  Virol J       Date:  2010-07-17       Impact factor: 4.099

9.  Insights into bacteriophage T5 structure from analysis of its morphogenesis genes and protein components.

Authors:  Yvan Zivanovic; Fabrice Confalonieri; Luc Ponchon; Rudi Lurz; Mohamed Chami; Ali Flayhan; Madalena Renouard; Alexis Huet; Paulette Decottignies; Alan R Davidson; Cécile Breyton; Pascale Boulanger
Journal:  J Virol       Date:  2013-11-06       Impact factor: 5.103

10.  Genomic investigation of lysogen formation and host lysis systems of the Salmonella temperate bacteriophage SPN9CC.

Authors:  Hakdong Shin; Ju-Hoon Lee; Hyunjin Yoon; Dong-Hyun Kang; Sangryeol Ryu
Journal:  Appl Environ Microbiol       Date:  2013-11-01       Impact factor: 4.792

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.