Literature DB >> 19025321

A database of IC50 values and principal component analysis of results from six basal cytotoxicity assays, for use in the modelling of the in vivo and in vitro data of the EU ACuteTox project.

Richard Clothier1, Paul Dierickx, Thaly Lakhanisky, Myriam Fabre, Monica Betanzos, Rodger Curren, Michael Sjöström, Hans Raabe, Nicola Bourne, Vanessa Hernandez, Jessica Mainez, Monika Owen, Sarah Watts, Roel Anthonissen.   

Abstract

The main aim of the ACuteTox project (part of the EU 6th Framework programme) is to demonstrate that animal tests for acute systemic toxicity can be replaced by alternative in vitro assays. In this project, data for 97 reference chemicals were collected in the AcuBase database, designed to handle deposited in vitro and in vivo (human and animal) data. To demonstrate the applicability of in vitro basal cytotoxicity tests and in vitro-in vivo modelling, it was deemed necessary to obtain data that were generated via defined standard operating procedures. The molar basal cytotoxicity IC50 values (the 50% inhibitory concentrations for the endpoint measured) for a mouse fibroblast cell line (3T3), a human hepatic cell line (HepG2), a rat hepatic cell line (Fa32), and a human neutrophil cell line (HL-60), were compared, and gave an R(2) correlation of 0.83. To identify chemicals that showed differential cytotoxicity to the various cell types involved, principal component analysis (PCA) was undertaken independently, once all the results had been returned. This showed that colchicine, cycloheximide, digoxin, 5-fluorouracil and hexachlorobenzene gave the lowest correlations with the first score vector of the PCA. The results presented are to be used to identify outliers that need to be further studied via the use of tissue-specific in vitro assays. 2008 FRAME.

Entities:  

Mesh:

Substances:

Year:  2008        PMID: 19025321     DOI: 10.1177/026119290803600509

Source DB:  PubMed          Journal:  Altern Lab Anim        ISSN: 0261-1929            Impact factor:   1.303


  5 in total

1.  Pharmacokinetic-pharmacodynamic modelling of atazanavir in hair among adolescents on antiretroviral treatment in Zimbabwe.

Authors:  Bernard Ngara; Simbarashe Zvada; Tariro Dianah Chawana; Charles Fungai Brian Nhachi; Simbarashe Rusakaniko
Journal:  BMC Pharmacol Toxicol       Date:  2021-05-24       Impact factor: 2.483

2.  Profiling animal toxicants by automatically mining public bioassay data: a big data approach for computational toxicology.

Authors:  Jun Zhang; Jui-Hua Hsieh; Hao Zhu
Journal:  PLoS One       Date:  2014-06-20       Impact factor: 3.240

3.  LUCS (Light-Up Cell System), a universal high throughput assay for homeostasis evaluation in live cells.

Authors:  Sylvain Derick; Camille Gironde; Pierre Perio; Karine Reybier; Françoise Nepveu; Alain Jauneau; Christophe Furger
Journal:  Sci Rep       Date:  2017-12-22       Impact factor: 4.379

4.  The EU-ToxRisk method documentation, data processing and chemical testing pipeline for the regulatory use of new approach methods.

Authors:  Alice Krebs; Barbara M A van Vugt-Lussenburg; Tanja Waldmann; Wiebke Albrecht; Jan Boei; Bas Ter Braak; Maja Brajnik; Thomas Braunbeck; Tim Brecklinghaus; Francois Busquet; Andras Dinnyes; Joh Dokler; Xenia Dolde; Thomas E Exner; Ciarán Fisher; David Fluri; Anna Forsby; Jan G Hengstler; Anna-Katharina Holzer; Zofia Janstova; Paul Jennings; Jaffar Kisitu; Julianna Kobolak; Manoj Kumar; Alice Limonciel; Jessica Lundqvist; Balázs Mihalik; Wolfgang Moritz; Giorgia Pallocca; Andrea Paola Cediel Ulloa; Manuel Pastor; Costanza Rovida; Ugis Sarkans; Johannes P Schimming; Bela Z Schmidt; Regina Stöber; Tobias Strassfeld; Bob van de Water; Anja Wilmes; Bart van der Burg; Catherine M Verfaillie; Rebecca von Hellfeld; Harry Vrieling; Nanette G Vrijenhoek; Marcel Leist
Journal:  Arch Toxicol       Date:  2020-07-06       Impact factor: 5.153

5.  The use of Bayesian methodology in the development and validation of a tiered assessment approach towards prediction of rat acute oral toxicity.

Authors:  James W Firman; Mark T D Cronin; Philip H Rowe; Elizaveta Semenova; John E Doe
Journal:  Arch Toxicol       Date:  2022-01-16       Impact factor: 5.153

  5 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.