Literature DB >> 19021169

Electron spin resonance shows common structural features for different classes of EcoRI-DNA complexes.

Katherine M Stone1, Jacqueline E Townsend, Jessica Sarver, Paul J Sapienza, Sunil Saxena, Linda Jen-Jacobson.   

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Year:  2008        PMID: 19021169      PMCID: PMC2792891          DOI: 10.1002/anie.200803588

Source DB:  PubMed          Journal:  Angew Chem Int Ed Engl        ISSN: 1433-7851            Impact factor:   15.336


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  23 in total

1.  The Protein Data Bank.

Authors:  H M Berman; J Westbrook; Z Feng; G Gilliland; T N Bhat; H Weissig; I N Shindyalov; P E Bourne
Journal:  Nucleic Acids Res       Date:  2000-01-01       Impact factor: 16.971

2.  The kinetic mechanism of EcoRI endonuclease.

Authors:  D J Wright; W E Jack; P Modrich
Journal:  J Biol Chem       Date:  1999-11-05       Impact factor: 5.157

Review 3.  Type II restriction endonucleases: structure and mechanism.

Authors:  A Pingoud; M Fuxreiter; V Pingoud; W Wende
Journal:  Cell Mol Life Sci       Date:  2005-03       Impact factor: 9.261

4.  How flexible are poly(para-phenyleneethynylene)s?

Authors:  Adelheid Godt; Miriam Schulte; Herbert Zimmermann; Gunnar Jeschke
Journal:  Angew Chem Int Ed Engl       Date:  2006-11-20       Impact factor: 15.336

5.  Self-aggregation of spin-labeled alamethicin in ePC vesicles studied by pulsed electron - electron double resonance.

Authors:  Alexander D Milov; Rimma I Samoilova; Yuri D Tsvetkov; Fernando Formaggio; Claudio Toniolo; Jan Raap
Journal:  J Am Chem Soc       Date:  2007-07-07       Impact factor: 15.419

Review 6.  Protein-DNA recognition complexes: conservation of structure and binding energy in the transition state.

Authors:  L Jen-Jacobson
Journal:  Biopolymers       Date:  1997       Impact factor: 2.505

7.  Sugar binding induces an outward facing conformation of LacY.

Authors:  Irina Smirnova; Vladimir Kasho; Jun-Yong Choe; Christian Altenbach; Wayne L Hubbell; H Ronald Kaback
Journal:  Proc Natl Acad Sci U S A       Date:  2007-10-09       Impact factor: 11.205

8.  Protein dynamics and monomer-monomer interactions in AntR activation by electron paramagnetic resonance and double electron-electron resonance.

Authors:  K Ilker Sen; Timothy M Logan; Piotr G Fajer
Journal:  Biochemistry       Date:  2007-09-19       Impact factor: 3.162

9.  A PELDOR-based nanometer distance ruler for oligonucleotides.

Authors:  Olav Schiemann; Nelly Piton; Yuguang Mu; Gerhard Stock; Joachim W Engels; Thomas F Prisner
Journal:  J Am Chem Soc       Date:  2004-05-12       Impact factor: 15.419

10.  Flexibility and lengths of bis-peptide nanostructures by electron spin resonance.

Authors:  Soraya Pornsuwan; Gregory Bird; Christian E Schafmeister; Sunil Saxena
Journal:  J Am Chem Soc       Date:  2006-03-29       Impact factor: 15.419

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  8 in total

1.  The structural flexibility of the human copper chaperone Atox1: Insights from combined pulsed EPR studies and computations.

Authors:  Ariel R Levy; Meital Turgeman; Lada Gevorkyan-Aiapetov; Sharon Ruthstein
Journal:  Protein Sci       Date:  2017-05-31       Impact factor: 6.725

2.  Rotameric preferences of a protein spin label at edge-strand β-sheet sites.

Authors:  Timothy F Cunningham; Soraya Pornsuwan; W Seth Horne; Sunil Saxena
Journal:  Protein Sci       Date:  2016-03-21       Impact factor: 6.725

3.  ESR spectroscopy identifies inhibitory Cu2+ sites in a DNA-modifying enzyme to reveal determinants of catalytic specificity.

Authors:  Zhongyu Yang; Michael R Kurpiewski; Ming Ji; Jacque E Townsend; Preeti Mehta; Linda Jen-Jacobson; Sunil Saxena
Journal:  Proc Natl Acad Sci U S A       Date:  2012-04-09       Impact factor: 11.205

4.  Thermodynamic and structural basis for relaxation of specificity in protein-DNA recognition.

Authors:  Paul J Sapienza; Tianyi Niu; Michael R Kurpiewski; Arabela Grigorescu; Linda Jen-Jacobson
Journal:  J Mol Biol       Date:  2013-09-14       Impact factor: 5.469

5.  Fluorescent marker for direct detection of specific dsDNA sequences.

Authors:  Rebecca Dylla-Spears; Jacqueline E Townsend; Lydia L Sohn; Linda Jen-Jacobson; Susan J Muller
Journal:  Anal Chem       Date:  2009-12-15       Impact factor: 6.986

6.  Sensitive Cu2+-Cu2+ distance measurements in a protein-DNA complex by double-quantum coherence ESR.

Authors:  Sharon Ruthstein; Ming Ji; Preeti Mehta; Linda Jen-Jacobson; Sunil Saxena
Journal:  J Phys Chem B       Date:  2013-05-10       Impact factor: 2.991

7.  Cleavage-Resistant Protein Labeling With Hydrophilic Trityl Enables Distance Measurements In-Cell.

Authors:  Zikri Hasanbasri; Kevin Singewald; Teresa D Gluth; Benoit Driesschaert; Sunil Saxena
Journal:  J Phys Chem B       Date:  2021-05-13       Impact factor: 3.466

8.  Cu(I) Controls Conformational States in Human Atox1 Metallochaperone: An EPR and Multiscale Simulation Study.

Authors:  Ortal Perkal; Zena Qasem; Meital Turgeman; Renana Schwartz; Lada Gevorkyan-Airapetov; Matic Pavlin; Alessandra Magistrato; Dan Thomas Major; Sharon Ruthstein
Journal:  J Phys Chem B       Date:  2020-05-22       Impact factor: 2.991

  8 in total

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