Literature DB >> 19019542

Is ITS-2 rDNA suitable marker for genetic characterization of Sarcoptes mites from different wild animals in different geographic areas?

S Alasaad1, D Soglia, V Spalenza, S Maione, R C Soriguer, J M Pérez, R Rasero, M P Ryser Degiorgis, H Nimmervoll, X Q Zhu, L Rossi.   

Abstract

The present study examined the relationship among individual Sarcoptes scabiei mites from 13 wild mammalian populations belonging to nine species in four European countries using the second internal transcribed spacer (ITS-2) of nuclear ribosomal DNA (rDNA) as genetic marker. The ITS-2 plus primer flanking 5.8S and 28S rDNA (ITS-2+) was amplified from individual mites by polymerase chain reaction (PCR) and the amplicons were sequenced directly. A total of 148 ITS-2+ sequences of 404bp in length were obtained and 67 variable sites were identified (16.59%). UPGMA analyses did not show any geographical or host-specific clustering, and a similar outcome was obtained using population pairwise Fst statistics. These results demonstrated that ITS-2 rDNA does not appear to be suitable for examining genetic diversity among mite populations.

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Year:  2008        PMID: 19019542     DOI: 10.1016/j.vetpar.2008.10.001

Source DB:  PubMed          Journal:  Vet Parasitol        ISSN: 0304-4017            Impact factor:   2.738


  28 in total

1.  Identification of astigmatid mites using ITS2 and COI regions.

Authors:  Bin Yang; Junlong Cai; Xunjia Cheng
Journal:  Parasitol Res       Date:  2010-11-12       Impact factor: 2.289

2.  Development of Conventional and Real-Time Quantitative PCR Assays for Diagnosis and Monitoring of Scabies.

Authors:  Samson S Y Wong; Rosana W S Poon; Sandy Chau; Sally C Y Wong; Kelvin K W To; Vincent C C Cheng; Kitty S C Fung; K Y Yuen
Journal:  J Clin Microbiol       Date:  2015-04-22       Impact factor: 5.948

3.  First detection of Sarcoptes scabiei from domesticated pig (Sus scrofa) and genetic characterization of S. scabiei from pet, farm and wild hosts in Israel.

Authors:  Oran Erster; Asael Roth; Paolo S Pozzi; Arieli Bouznach; Varda Shkap
Journal:  Exp Appl Acarol       Date:  2015-05-23       Impact factor: 2.132

4.  Genetic variability of wildlife-derived Sarcoptes scabiei determined by the ribosomal ITS-2 and mitochondrial 16S genes.

Authors:  Chun-Yan Li; Yin Sun; Yue Xie; Xuan Zhou; Xiao-Bin Gu; Wei-Ming Lai; Xue-Rong Peng; Guangyou Yang
Journal:  Exp Appl Acarol       Date:  2018-09-20       Impact factor: 2.132

5.  Wombats acquired scabies from humans and/or dogs from outside Australia.

Authors:  V Andriantsoanirina; F Ariey; A Izri; C Bernigaud; F Fang; J Guillot; O Chosidow; R Durand
Journal:  Parasitol Res       Date:  2015-03-28       Impact factor: 2.289

6.  Population identification of Sarcoptes hominis and Sarcoptes canis in China using DNA sequences.

Authors:  YaE Zhao; ZhiGuo Cao; Juan Cheng; Li Hu; JunXian Ma; YuanJun Yang; XiaoPeng Wang; JiHui Zeng; TianPing Wang
Journal:  Parasitol Res       Date:  2014-12-31       Impact factor: 2.289

7.  De novo RNA-Seq and functional annotation of Sarcoptes scabiei canis.

Authors:  Li Hu; YaE Zhao; YuanJun Yang; DongLing Niu; RuiLing Wang; Juan Cheng; Fan Yang
Journal:  Parasitol Res       Date:  2016-03-21       Impact factor: 2.289

8.  Two simple techniques for the safe Sarcoptes collection and individual mite DNA extraction.

Authors:  Dominga Soglia; Luisa Rambozzi; Sandra Maione; Veronica Spalenza; Stefano Sartore; Samer Alasaad; Paola Sacchi; Luca Rossi
Journal:  Parasitol Res       Date:  2009-08-05       Impact factor: 2.289

Review 9.  Sarcoptes mite from collection to DNA extraction: the lost realm of the neglected parasite.

Authors:  S Alasaad; L Rossi; R C Soriguer; L Rambozzi; D Soglia; J M Pérez; X Q Zhu
Journal:  Parasitol Res       Date:  2009-01-22       Impact factor: 2.289

10.  Molecular detection and characterization of Sarcoptes scabiei var canis using skin scrapings and skin biopsies.

Authors:  Onyeka Chidiebele Nwufoh; Nurudeen Ayinde Sadiq; Olusegun Fagbohun; Adebowale Adebiyi; Rofiat Adeshina; Ekeanyanwu Emmanuel; Benjamin Obukowho Emikpe
Journal:  J Parasit Dis       Date:  2020-11-09
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