Literature DB >> 19015912

Next-generation sequencing--the promise and perils of charting the great microbial unknown.

Lori A S Snyder1, Nick Loman, Mark J Pallen, Charles W Penn.   

Abstract

Mesh：

Year:  2008        PMID： 19015912     DOI： 10.1007/s00248-008-9465-9

Source DB:  PubMed          Journal:  Microb Ecol        ISSN： 0095-3628            Impact factor:   4.552


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  16 in total

1.  Diversity of the human intestinal microbial flora.

Authors:  Paul B Eckburg; Elisabeth M Bik; Charles N Bernstein; Elizabeth Purdom; Les Dethlefsen; Michael Sargent; Steven R Gill; Karen E Nelson; David A Relman
Journal:  Science       Date:  2005-04-14       Impact factor: 47.728

2.  Microbial population structures in the deep marine biosphere.

Authors:  Julie A Huber; David B Mark Welch; Hilary G Morrison; Susan M Huse; Phillip R Neal; David A Butterfield; Mitchell L Sogin
Journal:  Science       Date:  2007-10-05       Impact factor: 47.728

3.  The human microbiome project.

Authors:  Peter J Turnbaugh; Ruth E Ley; Micah Hamady; Claire M Fraser-Liggett; Rob Knight; Jeffrey I Gordon
Journal:  Nature       Date:  2007-10-18       Impact factor: 49.962

Review 4.  Bacterial evolution.

Authors:  C R Woese
Journal:  Microbiol Rev       Date:  1987-06

5.  Big data: Wikiomics.

Authors:  Mitch Waldrop
Journal:  Nature       Date:  2008-09-04       Impact factor: 49.962

6.  Big data: Welcome to the petacentre.

Authors:  Cory Doctorow
Journal:  Nature       Date:  2008-09-04       Impact factor: 49.962

7.  Microbiology: the inside story.

Authors:  Asher Mullard
Journal:  Nature       Date:  2008-05-29       Impact factor: 49.962

8.  An obesity-associated gut microbiome with increased capacity for energy harvest.

Authors:  Peter J Turnbaugh; Ruth E Ley; Michael A Mahowald; Vincent Magrini; Elaine R Mardis; Jeffrey I Gordon
Journal:  Nature       Date:  2006-12-21       Impact factor: 49.962

9.  Metagenomic analysis of the human distal gut microbiome.

Authors:  Steven R Gill; Mihai Pop; Robert T Deboy; Paul B Eckburg; Peter J Turnbaugh; Buck S Samuel; Jeffrey I Gordon; David A Relman; Claire M Fraser-Liggett; Karen E Nelson
Journal:  Science       Date:  2006-06-02       Impact factor: 47.728

10.  Evolution of mammals and their gut microbes.

Authors:  Ruth E Ley; Micah Hamady; Catherine Lozupone; Peter J Turnbaugh; Rob Roy Ramey; J Stephen Bircher; Michael L Schlegel; Tammy A Tucker; Mark D Schrenzel; Rob Knight; Jeffrey I Gordon
Journal:  Science       Date:  2008-05-22       Impact factor: 47.728
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  7 in total

Review 1.  Application of 'next-generation' sequencing technologies to microbial genetics.

Authors:  Daniel MacLean; Jonathan D G Jones; David J Studholme
Journal:  Nat Rev Microbiol       Date:  2009-04       Impact factor: 60.633

2.  Comparative genome analysis provides insights into the evolution and adaptation of Pseudomonas syringae pv. aesculi on Aesculus hippocastanum.

Authors:  Sarah Green; David J Studholme; Bridget E Laue; Federico Dorati; Helen Lovell; Dawn Arnold; Joan E Cottrell; Stephen Bridgett; Mark Blaxter; Edgar Huitema; Richard Thwaites; Paul M Sharp; Robert W Jackson; Sophien Kamoun
Journal:  PLoS One       Date:  2010-04-19       Impact factor: 3.240

3.  Genome sequence of the pattern forming Paenibacillus vortex bacterium reveals potential for thriving in complex environments.

Authors:  Alexandra Sirota-Madi; Tsviya Olender; Yael Helman; Colin Ingham; Ina Brainis; Dalit Roth; Efrat Hagi; Leonid Brodsky; Dena Leshkowitz; Vladimir Galatenko; Vladimir Nikolaev; Raja C Mugasimangalam; Sharron Bransburg-Zabary; David L Gutnick; Doron Lancet; Eshel Ben-Jacob
Journal:  BMC Genomics       Date:  2010-12-17       Impact factor: 3.969

4.  SOLiD sequencing of four Vibrio vulnificus genomes enables comparative genomic analysis and identification of candidate clade-specific virulence genes.

Authors:  Paul A Gulig; Valérie de Crécy-Lagard; Anita C Wright; Brandon Walts; Marina Telonis-Scott; Lauren M McIntyre
Journal:  BMC Genomics       Date:  2010-09-24       Impact factor: 3.969

5.  The Influence of DNA Extraction Procedure and Primer Set on the Bacterial Community Analysis by Pyrosequencing of Barcoded 16S rRNA Gene Amplicons.

Authors:  Ingo C Starke; Wilfried Vahjen; Robert Pieper; Jürgen Zentek
Journal:  Mol Biol Int       Date:  2014-07-10

6.  Mycoplasma agassizii, an opportunistic pathogen of tortoises, shows very little genetic variation across the Mojave and Sonoran Deserts.

Authors:  Agusto Luzuriaga-Neira; Franziska C Sandmeier; Chava L Weitzman; C Richard Tracy; Shalyn N Bauschlicher; Richard L Tillett; David Alvarez-Ponce
Journal:  PLoS One       Date:  2021-02-03       Impact factor: 3.240

Review 7.  Integrating Computational Methods to Investigate the Macroecology of Microbiomes.

Authors:  Rilquer Mascarenhas; Flávia M Ruziska; Eduardo Freitas Moreira; Amanda B Campos; Miguel Loiola; Kaike Reis; Amaro E Trindade-Silva; Felipe A S Barbosa; Lucas Salles; Rafael Menezes; Rafael Veiga; Felipe H Coutinho; Bas E Dutilh; Paulo R Guimarães; Ana Paula A Assis; Anderson Ara; José G V Miranda; Roberto F S Andrade; Bruno Vilela; Pedro Milet Meirelles
Journal:  Front Genet       Date:  2020-01-17       Impact factor: 4.599
  7 in total

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