Literature DB >> 19013430

A mutational analysis of DNA mimicry by ocr, the gene 0.3 antirestriction protein of bacteriophage T7.

Augoustinos S Stephanou1, Gareth A Roberts, Mark R Tock, Emily H Pritchard, Rachel Turkington, Margaret Nutley, Alan Cooper, David T F Dryden.   

Abstract

The ocr protein of bacteriophage T7 is a structural and electrostatic mimic of approximately 24 base pairs of double-stranded B-form DNA. As such, it inhibits all Type I restriction and modification (R/M) enzymes by blocking their DNA binding grooves and inactivates them. This allows the infection of the bacterial cell by T7 to proceed unhindered by the action of the R/M defence system. We have mutated aspartate and glutamate residues on the surface of ocr to investigate their contribution to the tight binding between the EcoKI Type I R/M enzyme and ocr. Contrary to expectations, all of the single and double site mutations of ocr constructed were active as anti-R/M proteins in vivo and in vitro indicating that the mimicry of DNA by ocr is very resistant to change.

Entities:  

Mesh:

Substances:

Year:  2008        PMID: 19013430     DOI: 10.1016/j.bbrc.2008.11.014

Source DB:  PubMed          Journal:  Biochem Biophys Res Commun        ISSN: 0006-291X            Impact factor:   3.575


  12 in total

1.  Fusion of GFP to the M.EcoKI DNA methyltransferase produces a new probe of Type I DNA restriction and modification enzymes.

Authors:  Kai Chen; Gareth A Roberts; Augoustinos S Stephanou; Laurie P Cooper; John H White; David T F Dryden
Journal:  Biochem Biophys Res Commun       Date:  2010-06-19       Impact factor: 3.575

2.  De novo design of protein mimics of B-DNA.

Authors:  Deniz Yüksel; Piero R Bianco; Krishna Kumar
Journal:  Mol Biosyst       Date:  2016-01

3.  Structure and operation of the DNA-translocating type I DNA restriction enzymes.

Authors:  Christopher K Kennaway; James E Taylor; Chun Feng Song; Wojciech Potrzebowski; William Nicholson; John H White; Anna Swiderska; Agnieszka Obarska-Kosinska; Philip Callow; Laurie P Cooper; Gareth A Roberts; Jean-Baptiste Artero; Janusz M Bujnicki; John Trinick; G Geoff Kneale; David T F Dryden
Journal:  Genes Dev       Date:  2012-01-01       Impact factor: 11.361

4.  Exploring the DNA mimicry of the Ocr protein of phage T7.

Authors:  Gareth A Roberts; Augoustinos S Stephanou; Nisha Kanwar; Angela Dawson; Laurie P Cooper; Kai Chen; Margaret Nutley; Alan Cooper; Garry W Blakely; David T F Dryden
Journal:  Nucleic Acids Res       Date:  2012-06-07       Impact factor: 16.971

5.  Novel dimeric structure of phage φ29-encoded protein p56: insights into uracil-DNA glycosylase inhibition.

Authors:  Juan Luis Asensio; Laura Pérez-Lago; José M Lázaro; Carlos González; Gemma Serrano-Heras; Margarita Salas
Journal:  Nucleic Acids Res       Date:  2011-09-02       Impact factor: 16.971

6.  Extensive DNA mimicry by the ArdA anti-restriction protein and its role in the spread of antibiotic resistance.

Authors:  Stephen A McMahon; Gareth A Roberts; Kenneth A Johnson; Laurie P Cooper; Huanting Liu; John H White; Lester G Carter; Bansi Sanghvi; Muse Oke; Malcolm D Walkinshaw; Garry W Blakely; James H Naismith; David T F Dryden
Journal:  Nucleic Acids Res       Date:  2009-06-08       Impact factor: 16.971

7.  The structure of the KlcA and ArdB proteins reveals a novel fold and antirestriction activity against Type I DNA restriction systems in vivo but not in vitro.

Authors:  Dimitra Serfiotis-Mitsa; Andrew P Herbert; Gareth A Roberts; Dinesh C Soares; John H White; Garry W Blakely; Dusan Uhrín; David T F Dryden
Journal:  Nucleic Acids Res       Date:  2009-12-09       Impact factor: 16.971

8.  Dissection of the DNA mimicry of the bacteriophage T7 Ocr protein using chemical modification.

Authors:  Augoustinos S Stephanou; Gareth A Roberts; Laurie P Cooper; David J Clarke; Andrew R Thomson; C Logan MacKay; Margaret Nutley; Alan Cooper; David T F Dryden
Journal:  J Mol Biol       Date:  2009-06-10       Impact factor: 5.469

9.  ArdA proteins from different mobile genetic elements can bind to the EcoKI Type I DNA methyltransferase of E. coli K12.

Authors:  Kai Chen; Marcel Reuter; Bansi Sanghvi; Gareth A Roberts; Laurie P Cooper; Matthew Tilling; Garry W Blakely; David T F Dryden
Journal:  Biochim Biophys Acta       Date:  2013-12-22

Review 10.  Type I restriction enzymes and their relatives.

Authors:  Wil A M Loenen; David T F Dryden; Elisabeth A Raleigh; Geoffrey G Wilson
Journal:  Nucleic Acids Res       Date:  2013-09-24       Impact factor: 16.971

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.