Literature DB >> 1900987

The binding of D-gluconohydroximo-1,5-lactone to glycogen phosphorylase. Kinetic, ultracentrifugation and crystallographic studies.

A C Papageorgiou1, N G Oikonomakos, D D Leonidas, B Bernet, D Beer, A Vasella.   

Abstract

Combined kinetic, ultracentrifugation and X-ray-crystallographic studies have characterized the effect of the beta-glucosidase inhibitor gluconohydroximo-1,5-lactone on the catalytic and structural properties of glycogen phosphorylase. In the direction of glycogen synthesis, gluconohydroximo-1,5-lactone was found to competitively inhibit both the b (Ki 0.92 mM) and the alpha form of the enzyme (Ki 0.76 mM) with respect to glucose 1-phosphate in synergism with caffeine. In the direction of glycogen breakdown, gluconohydroximo-1,5-lactone was found to inhibit phosphorylase b in a non-competitive mode with respect to phosphate, and no synergism with caffeine could be demonstrated. Ultracentrifugation and crystallization experiments demonstrated that gluconohydroximo-1,5-lactone was able to induce dissociation of tetrameric phosphorylase alpha and stabilization of the dimeric T-state conformation. A crystallographic binding study with 100 mM-gluconohydroximo-1,5-lactone at 0.24 nm (2.4 A) resolution showed a major peak at the catalytic site, and no significant conformational changes were observed. Analysis of the electron-density map indicated that the ligand adopts a chair conformation. The results are discussed with reference to the ability of the catalytic site of the enzyme to distinguish between two or more conformations of the glucopyranose ring.

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Year:  1991        PMID: 1900987      PMCID: PMC1150141          DOI: 10.1042/bj2740329

Source DB:  PubMed          Journal:  Biochem J        ISSN: 0264-6021            Impact factor:   3.857


  39 in total

1.  Refined crystal structure of the phosphorylase-heptulose 2-phosphate-oligosaccharide-AMP complex.

Authors:  L N Johnson; K R Acharya; M D Jordan; P J McLaughlin
Journal:  J Mol Biol       Date:  1990-02-05       Impact factor: 5.469

2.  Diffraction methods for biological macromolecules. Interactive computer graphics: FRODO.

Authors:  T A Jones
Journal:  Methods Enzymol       Date:  1985       Impact factor: 1.600

Review 3.  Phosphorylase: control and activity.

Authors:  J A Jenkins; L N Johnson; D I Stuart; E A Stura; K S Wilson; G Zanotti
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  1981-06-26       Impact factor: 6.237

4.  Catalytic site of glycogen phosphorylase: structure of the T state and specificity for alpha-D-glucose.

Authors:  S R Sprang; E J Goldsmith; R J Fletterick; S G Withers; N B Madsen
Journal:  Biochemistry       Date:  1982-10-12       Impact factor: 3.162

5.  The effect of AMP on inhibition of muscle phosphorylase a by glucose derivatives.

Authors:  P J Kasvinsky
Journal:  J Biol Chem       Date:  1982-09-25       Impact factor: 5.157

6.  Catalytic site of glycogen phosphorylase: structural changes during activation and mechanistic implications.

Authors:  S G Withers; N B Madsen; S R Sprang; R J Fletterick
Journal:  Biochemistry       Date:  1982-10-12       Impact factor: 3.162

7.  Effects of substrates and a substrate analog on the binding of 5'-adenylic acid to muscle phosphorylase a.

Authors:  E Helmreich; M C Michaelides; C F Cori
Journal:  Biochemistry       Date:  1967-12       Impact factor: 3.162

8.  Site-site interactions in glycogen phosphorylase b probed by ligands specific for each site.

Authors:  N B Madsen; S Shechosky; R J Fletterick
Journal:  Biochemistry       Date:  1983-09-13       Impact factor: 3.162

9.  Active form of pyridoxal phosphate in glycogen phosphorylase. Phosphorus-31 nuclear magentic resonance investigation.

Authors:  S G Withers; N B Madsen; B D Sykes
Journal:  Biochemistry       Date:  1981-03-31       Impact factor: 3.162

10.  Effect of glucose-6-P on the catalytic and structural properties of glycogen phosphorylase a.

Authors:  A E Melpidou; N G Oikonomakos
Journal:  FEBS Lett       Date:  1983-04-05       Impact factor: 4.124

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  2 in total

1.  N-acetyl-beta-D-glucopyranosylamine: a potent T-state inhibitor of glycogen phosphorylase. A comparison with alpha-D-glucose.

Authors:  N G Oikonomakos; M Kontou; S E Zographos; K A Watson; L N Johnson; C J Bichard; G W Fleet; K R Acharya
Journal:  Protein Sci       Date:  1995-12       Impact factor: 6.725

2.  Laue and monochromatic diffraction studies on catalysis in phosphorylase b crystals.

Authors:  E M Duke; S Wakatsuki; A Hadfield; L N Johnson
Journal:  Protein Sci       Date:  1994-08       Impact factor: 6.725

  2 in total

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