Literature DB >> 19008549

Lipid binding domains: more than simple lipid effectors.

Robert V Stahelin1.   

Abstract

The spatial and temporal regulation of lipid molecules in cell membranes is a hallmark of cellular signaling and membrane trafficking events. Lipid-mediated targeting provides for strict control and versatility, because cell membranes harbor a large number of lipid molecules with variation in head group and acyl chain structures. Signaling and trafficking proteins contain a large number of modular domains that exhibit specific lipid binding properties and play a critical role in their localization and function. Nearly 20 years of research including structural, computational, biochemical and biophysical studies have demonstrated how these lipid-binding domains recognize their target lipid and achieve subcellular localization. The integration of this individual lipid-binding domain data in the context of the full-length proteins, macromolecular signaling complexes, and the lipidome is only beginning to be unraveled and represents a target of therapeutic development. This review brings together recent findings and classical concepts to concisely summarize the lipid-binding domain field while illustrating where the field is headed and how the gaps may be filled in with new technologies.

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Year:  2008        PMID: 19008549      PMCID: PMC2674730          DOI: 10.1194/jlr.R800078-JLR200

Source DB:  PubMed          Journal:  J Lipid Res        ISSN: 0022-2275            Impact factor:   5.922


  44 in total

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2.  Four-scale description of membrane sculpting by BAR domains.

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Journal:  Biophys J       Date:  2008-05-30       Impact factor: 4.033

3.  A new phosphatidylinositol 4,5-bisphosphate-binding site located in the C2 domain of protein kinase Calpha.

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4.  Structural mechanism for lipid activation of the Rac-specific GAP, beta2-chimaerin.

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Journal:  Cell       Date:  2004-10-29       Impact factor: 41.582

5.  Calcium-sensitive phospholipid binding properties of normal and mutant ferlin C2 domains.

Authors:  Dawn Belt Davis; Katherine R Doherty; Anthony J Delmonte; Elizabeth M McNally
Journal:  J Biol Chem       Date:  2002-04-16       Impact factor: 5.157

6.  Molecular mechanism of an oncogenic mutation that alters membrane targeting: Glu17Lys modifies the PIP lipid specificity of the AKT1 PH domain.

Authors:  Kyle E Landgraf; Carissa Pilling; Joseph J Falke
Journal:  Biochemistry       Date:  2008-11-25       Impact factor: 3.162

7.  Identification of an autoinhibitory mechanism that restricts C1 domain-mediated activation of the Rac-GAP alpha2-chimaerin.

Authors:  Francheska Colón-González; Federico Coluccio Leskow; Marcelo G Kazanietz
Journal:  J Biol Chem       Date:  2008-09-30       Impact factor: 5.157

8.  Calcium-dependent activation of a multifunctional protein kinase by membrane phospholipids.

Authors:  Y Takai; A Kishimoto; Y Iwasa; Y Kawahara; T Mori; Y Nishizuka
Journal:  J Biol Chem       Date:  1979-05-25       Impact factor: 5.157

Review 9.  Wealth of opportunity - the C1 domain as a target for drug development.

Authors:  P M Blumberg; N Kedei; N E Lewin; D Yang; G Czifra; Y Pu; M L Peach; V E Marquez
Journal:  Curr Drug Targets       Date:  2008-08       Impact factor: 3.465

10.  Binding of the PX domain of p47(phox) to phosphatidylinositol 3,4-bisphosphate and phosphatidic acid is masked by an intramolecular interaction.

Authors:  Dimitrios Karathanassis; Robert V Stahelin; Jerónimo Bravo; Olga Perisic; Christine M Pacold; Wonhwa Cho; Roger L Williams
Journal:  EMBO J       Date:  2002-10-01       Impact factor: 11.598

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  46 in total

Review 1.  Roles for dysfunctional sphingolipid metabolism in Alzheimer's disease neuropathogenesis.

Authors:  Norman J Haughey; Veera V R Bandaru; Mihyun Bae; Mark P Mattson
Journal:  Biochim Biophys Acta       Date:  2010-05-07

Review 2.  Sphingolipids in neurodegeneration.

Authors:  Norman J Haughey
Journal:  Neuromolecular Med       Date:  2010-08-25       Impact factor: 3.843

Review 3.  Plasmodesmata viewed as specialised membrane adhesion sites.

Authors:  Jens Tilsner; Khalid Amari; Lesley Torrance
Journal:  Protoplasma       Date:  2010-10-12       Impact factor: 3.356

4.  Phosphoenolpyruvate carboxylase from C4 leaves is selectively targeted for inhibition by anionic phospholipids.

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Journal:  Plant Physiol       Date:  2009-12-09       Impact factor: 8.340

5.  Sphingolipid transfer proteins defined by the GLTP-fold.

Authors:  Lucy Malinina; Dhirendra K Simanshu; Xiuhong Zhai; Valeria R Samygina; RaviKanth Kamlekar; Roopa Kenoth; Borja Ochoa-Lizarralde; Margarita L Malakhova; Julian G Molotkovsky; Dinshaw J Patel; Rhoderick E Brown
Journal:  Q Rev Biophys       Date:  2015-03-23       Impact factor: 5.318

6.  Structural features and lipid binding domain of tubulin on biomimetic mitochondrial membranes.

Authors:  David P Hoogerheide; Sergei Y Noskov; Daniel Jacobs; Lucie Bergdoll; Vitalii Silin; David L Worcester; Jeff Abramson; Hirsh Nanda; Tatiana K Rostovtseva; Sergey M Bezrukov
Journal:  Proc Natl Acad Sci U S A       Date:  2017-04-18       Impact factor: 11.205

7.  Inhibition of neutral sphingomyelinase-2 perturbs brain sphingolipid balance and spatial memory in mice.

Authors:  Nino Tabatadze; Alena Savonenko; Hongjun Song; Veera Venkata Ratnam Bandaru; Michael Chu; Norman J Haughey
Journal:  J Neurosci Res       Date:  2010-10       Impact factor: 4.164

Review 8.  Cellular and molecular interactions of phosphoinositides and peripheral proteins.

Authors:  Robert V Stahelin; Jordan L Scott; Cary T Frick
Journal:  Chem Phys Lipids       Date:  2014-02-17       Impact factor: 3.329

9.  A CC-SAM, for coiled coil-sterile α motif, domain targets the scaffold KSR-1 to specific sites in the plasma membrane.

Authors:  Dorothy Koveal; Natasha Schuh-Nuhfer; Daniel Ritt; Rebecca Page; Deborah K Morrison; Wolfgang Peti
Journal:  Sci Signal       Date:  2012-12-18       Impact factor: 8.192

10.  Site-directed Mutagenesis Shows the Significance of Interactions with Phospholipids and the G-protein OsYchF1 for the Physiological Functions of the Rice GTPase-activating Protein 1 (OsGAP1).

Authors:  Yuk-Lin Yung; Ming-Yan Cheung; Rui Miao; Yu-Hang Fong; Kwan-Pok Li; Mei-Hui Yu; Mee-Len Chye; Kam-Bo Wong; Hon-Ming Lam
Journal:  J Biol Chem       Date:  2015-08-18       Impact factor: 5.157

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