Literature DB >> 19007911

Preliminary analysis of miRNA pathway in Schistosoma mansoni.

Matheus S Gomes1, Fernanda J Cabral, Liana K Jannotti-Passos, Omar Carvalho, Vanderlei Rodrigues, Elio H Baba, Renata G Sá.   

Abstract

RNA silencing refers to a series of nuclear and cytoplasmatic processes involved in the post-transcriptional regulation of gene expression or post-transcriptional gene silencing (PTGS), either by sequence-specific mRNA degradation or by translational arrest. The best characterized small RNAs are microRNAs (miRNAs), which predominantly perform gene silencing through post-transcriptional mechanisms. In this work we used bioinformatic approaches to identify the parasitic trematode Schistosoma mansoni sequences that are similar to enzymes involved in the post-transcriptional gene silencing mediated by miRNA pathway. We used amino acid sequences of well-known proteins involved in the miRNA pathway against S. mansoni genome and transcriptome databases identifying a total of 13 putative proteins in the parasite. In addition, the transcript levels of SmDicer1 and SmAgo2/3/4 were identified by qRT-PCR using cercariae, adult worms, eggs and in vitro cultivated schistosomula. Our results showed that the SmDicer1 and SmAgo2/3/4 are differentially expressed during schistosomula development, suggesting that the miRNA pathway is regulated at the transcript level and therefore may control gene expression during the life cycle of S. mansoni.

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Year:  2008        PMID: 19007911     DOI: 10.1016/j.parint.2008.10.002

Source DB:  PubMed          Journal:  Parasitol Int        ISSN: 1383-5769            Impact factor:   2.230


  29 in total

1.  Vector-based RNA interference of cathepsin B1 in Schistosoma mansoni.

Authors:  Elissaveta B Tchoubrieva; Poh C Ong; Robert N Pike; Paul J Brindley; Bernd H Kalinna
Journal:  Cell Mol Life Sci       Date:  2010-03-26       Impact factor: 9.261

Review 2.  MicroRNAs of parasites: current status and future perspectives.

Authors:  Quan Liu; Wenbin Tuo; Hongwei Gao; Xing-Quan Zhu
Journal:  Parasitol Res       Date:  2010-06-08       Impact factor: 2.289

3.  The genomic proliferation of transposable elements in colonizing populations: Schistosoma mansoni in the new world.

Authors:  Bhagya K Wijayawardena; J Andrew DeWoody; Dennis J Minchella
Journal:  Genetica       Date:  2015-02-14       Impact factor: 1.082

4.  Modeling and analysis of Schistosoma Argonaute protein molecular spatial conformation.

Authors:  Jianhua Zhang; Zhigang Shang; Xiaohui Zhang; Yuntao Zhang
Journal:  Asian Pac J Trop Biomed       Date:  2011-08

5.  Characterization of export receptor exportins (XPOs) in the parasite Schistosoma mansoni.

Authors:  Fabiano C P Abreu; Roberta V Pereira; Victor F Oliveira; Matheus de S Gomes; Liana K Jannotti-Passos; William C Borges; Renata Guerra-Sá
Journal:  Parasitol Res       Date:  2013-09-08       Impact factor: 2.289

Review 6.  In vitro manipulation of gene expression in larval Schistosoma: a model for postgenomic approaches in Trematoda.

Authors:  Timothy P Yoshino; Nathalie Dinguirard; Marina de Moraes Mourão
Journal:  Parasitology       Date:  2009-12-07       Impact factor: 3.234

7.  RNA interference in Schistosoma mansoni schistosomula: selectivity, sensitivity and operation for larger-scale screening.

Authors:  Saša Stefanić; Jan Dvořák; Martin Horn; Simon Braschi; Daniel Sojka; Debbie S Ruelas; Brian Suzuki; Kee-Chong Lim; Stephanie D Hopkins; James H McKerrow; Conor R Caffrey
Journal:  PLoS Negl Trop Dis       Date:  2010-10-19

8.  Analysis and characterization of the genes encoding the Dicer and Argonaute proteins of Schistosoma japonicum.

Authors:  Rong Luo; Xiangyang Xue; Zhangxun Wang; Jun Sun; Ying Zou; Weiqing Pan
Journal:  Parasit Vectors       Date:  2010-09-17       Impact factor: 3.876

9.  RNA interference in schistosomes: machinery and methodology.

Authors:  Greice Krautz-Peterson; Rita Bhardwaj; Zahra Faghiri; Cibele A Tararam; Patrick J Skelly
Journal:  Parasitology       Date:  2009-09-21       Impact factor: 3.234

10.  Homology-based annotation of non-coding RNAs in the genomes of Schistosoma mansoni and Schistosoma japonicum.

Authors:  Claudia S Copeland; Manja Marz; Dominic Rose; Jana Hertel; Paul J Brindley; Clara Bermudez Santana; Stephanie Kehr; Camille Stephan-Otto Attolini; Peter F Stadler
Journal:  BMC Genomics       Date:  2009-10-08       Impact factor: 3.969

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