Literature DB >> 19003871

A method based on bead flows for spot detection on 2-D gel images.

Olivier Langella1, Michel Zivy.   

Abstract

A method has been developed to detect spots on 2-D gel images. It is based on an analogy with beads flowing uphill on the surface of the gel image and on the analysis of their paths. This method does not need image smoothing, thereby allowing for conservation of the resolution of the original image. In addition, it allows for the detection of overlapping spots, even when there is no valley between their centres.

Mesh：

Year:  2008        PMID： 19003871     DOI： 10.1002/pmic.200800644

Source DB:  PubMed          Journal:  Proteomics        ISSN： 1615-9853            Impact factor:   3.984


  3 in total

1.  Feature detection techniques for preprocessing proteomic data.

Authors:  Kimberly F Sellers; Jeffrey C Miecznikowski
Journal:  Int J Biomed Imaging       Date:  2010-05-05

2.  Two-Dimensional Gel Electrophoresis Image Analysis.

Authors:  Elisa Robotti; Elisa Calà; Emilio Marengo
Journal:  Methods Mol Biol       Date:  2021

3.  Spot quantification in two dimensional gel electrophoresis image analysis: comparison of different approaches and presentation of a novel compound fitting algorithm.

Authors:  Jan M Brauner; Teja W Groemer; Armin Stroebel; Simon Grosse-Holz; Timo Oberstein; Jens Wiltfang; Johannes Kornhuber; Juan Manuel Maler
Journal:  BMC Bioinformatics       Date:  2014-06-11       Impact factor: 3.169
  3 in total

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