Literature DB >> 19003473

Causal networks in simulated neural systems.

Anil K Seth1.   

Abstract

Neurons engage in causal interactions with one another and with the surrounding body and environment. Neural systems can therefore be analyzed in terms of causal networks, without assumptions about information processing, neural coding, and the like. Here, we review a series of studies analyzing causal networks in simulated neural systems using a combination of Granger causality analysis and graph theory. Analysis of a simple target-fixation model shows that causal networks provide intuitive representations of neural dynamics during behavior which can be validated by lesion experiments. Extension of the approach to a neurorobotic model of the hippocampus and surrounding areas identifies shifting causal pathways during learning of a spatial navigation task. Analysis of causal interactions at the population level in the model shows that behavioral learning is accompanied by selection of specific causal pathways-"causal cores"-from among large and variable repertoires of neuronal interactions. Finally, we argue that a causal network perspective may be useful for characterizing the complex neural dynamics underlying consciousness.

Year:  2007        PMID: 19003473      PMCID: PMC2289248          DOI: 10.1007/s11571-007-9031-z

Source DB:  PubMed          Journal:  Cogn Neurodyn        ISSN: 1871-4080            Impact factor:   5.082


  53 in total

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Authors:  R C deCharms; A Zador
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Authors:  Roberta M Kelly; Peter L Strick
Journal:  Prog Brain Res       Date:  2004       Impact factor: 2.453

Review 3.  LTP and LTD: an embarrassment of riches.

Authors:  Robert C Malenka; Mark F Bear
Journal:  Neuron       Date:  2004-09-30       Impact factor: 17.173

Review 4.  Amygdala, long-term potentiation, and fear conditioning.

Authors:  Alexander E Dityatev; Vadim Y Bolshakov
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Review 5.  Tracing the neuroanatomical profiles of reward pathways with markers of neuronal activation.

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Journal:  Rev Neurosci       Date:  2004       Impact factor: 4.353

Review 6.  Neural Darwinism and consciousness.

Authors:  Anil K Seth; Bernard J Baars
Journal:  Conscious Cogn       Date:  2005-03

7.  Characterizing functional hippocampal pathways in a brain-based device as it solves a spatial memory task.

Authors:  Jeffrey L Krichmar; Douglas A Nitz; Joseph A Gally; Gerald M Edelman
Journal:  Proc Natl Acad Sci U S A       Date:  2005-01-31       Impact factor: 11.205

8.  Analyzing functional connectivity using a network likelihood model of ensemble neural spiking activity.

Authors:  Murat Okatan; Matthew A Wilson; Emery N Brown
Journal:  Neural Comput       Date:  2005-09       Impact factor: 2.026

9.  Dynamic causal modelling.

Authors:  K J Friston; L Harrison; W Penny
Journal:  Neuroimage       Date:  2003-08       Impact factor: 6.556

10.  Measuring information integration.

Authors:  Giulio Tononi; Olaf Sporns
Journal:  BMC Neurosci       Date:  2003-12-02       Impact factor: 3.288

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  20 in total

1.  Interpreting neurodynamics: concepts and facts.

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Journal:  Cogn Neurodyn       Date:  2008-10-15       Impact factor: 5.082

2.  A method for the estimation of functional brain connectivity from time-series data.

Authors:  A Wilmer; M H E de Lussanet; M Lappe
Journal:  Cogn Neurodyn       Date:  2010-03-06       Impact factor: 5.082

3.  More discussions for granger causality and new causality measures.

Authors:  Sanqing Hu; Yu Cao; Jianhai Zhang; Wanzeng Kong; Kun Yang; Yanbin Zhang; Xun Li
Journal:  Cogn Neurodyn       Date:  2011-09-27       Impact factor: 5.082

4.  Estimating causal interaction between prefrontal cortex and striatum by transfer entropy.

Authors:  Chaofei Ma; Xiaochuan Pan; Rubin Wang; Masamichi Sakagami
Journal:  Cogn Neurodyn       Date:  2013-01-04       Impact factor: 5.082

5.  On the reciprocal interaction between believing and feeling: an adaptive agent modelling perspective.

Authors:  Zulfiqar A Memon; Jan Treur
Journal:  Cogn Neurodyn       Date:  2010-10-06       Impact factor: 5.082

6.  Identification and validation of effective connectivity networks in functional magnetic resonance imaging using switching linear dynamic systems.

Authors:  Jason F Smith; Ajay Pillai; Kewei Chen; Barry Horwitz
Journal:  Neuroimage       Date:  2009-12-05       Impact factor: 6.556

7.  Children with well controlled epilepsy possess different spatio-temporal patterns of causal network connectivity during a visual working memory task.

Authors:  Foteini Protopapa; Constantinos I Siettos; Ivan Myatchin; Lieven Lagae
Journal:  Cogn Neurodyn       Date:  2016-01-06       Impact factor: 5.082

8.  Default network connectivity decodes brain states with simulated microgravity.

Authors:  Ling-Li Zeng; Yang Liao; Zongtan Zhou; Hui Shen; Yadong Liu; Xufeng Liu; Dewen Hu
Journal:  Cogn Neurodyn       Date:  2015-10-14       Impact factor: 5.082

9.  A novel extended Granger Causal Model approach demonstrates brain hemispheric differences during face recognition learning.

Authors:  Tian Ge; Keith M Kendrick; Jianfeng Feng
Journal:  PLoS Comput Biol       Date:  2009-11-20       Impact factor: 4.475

10.  Impact of environmental inputs on reverse-engineering approach to network structures.

Authors:  Jianhua Wu; James L Sinfield; Vicky Buchanan-Wollaston; Jianfeng Feng
Journal:  BMC Syst Biol       Date:  2009-12-04
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