Literature DB >> 18999989

Controlling chemistry by geometry in nanoscale systems.

L Lizana1, Z Konkoli, B Bauer, A Jesorka, O Orwar.   

Abstract

Scientific literature dealing with the rates, mechanisms, and thermodynamic properties of chemical reactions in condensed media almost exclusively assumes that reactions take place in volumes that do not change over time. The reaction volumes are compact (such as a sphere, a cube, or a cylinder) and do not vary in shape. In this review article, we discuss two important systems at small length scales (approximately 10 nm to 5 microm), in which these basic assumptions are violated. The first system exists in cell biology and is represented by the tiniest functional components (i.e., single cells, organelles, and other physically delineated cellular microenvironments). The second system comprises nanofluidic devices, in particular devices made from soft-matter materials such as lipid nanotube-vesicle networks. In these two systems, transport, mixing, and shape changes can be achieved at or very close to thermal energy levels. In further contrast to macroscopic systems, mixing by diffusion is extremely efficient, and kinetics can be controlled by shape and volume changes.

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Year:  2009        PMID: 18999989     DOI: 10.1146/annurev.physchem.040808.090255

Source DB:  PubMed          Journal:  Annu Rev Phys Chem        ISSN: 0066-426X            Impact factor:   12.703


  11 in total

1.  Two-dimensional enzyme diffusion in laterally confined DNA monolayers.

Authors:  Matteo Castronovo; Agnese Lucesoli; Pietro Parisse; Anastasia Kurnikova; Aseem Malhotra; Mario Grassi; Gabriele Grassi; Bruna Scaggiante; Loredana Casalis; Giacinto Scoles
Journal:  Nat Commun       Date:  2011       Impact factor: 14.919

2.  Generation of phospholipid vesicle-nanotube networks and transport of molecules therein.

Authors:  Aldo Jesorka; Natalia Stepanyants; Haijiang Zhang; Bahanur Ortmen; Bodil Hakonen; Owe Orwar
Journal:  Nat Protoc       Date:  2011-05-19       Impact factor: 13.491

Review 3.  Mitochondrial Morphofunction in Mammalian Cells.

Authors:  Elianne P Bulthuis; Merel J W Adjobo-Hermans; Peter H G M Willems; Werner J H Koopman
Journal:  Antioxid Redox Signal       Date:  2018-11-29       Impact factor: 8.401

4.  Mixing subattolitre volumes in a quantitative and highly parallel manner with soft matter nanofluidics.

Authors:  Sune M Christensen; Pierre-Yves Bolinger; Nikos S Hatzakis; Michael W Mortensen; Dimitrios Stamou
Journal:  Nat Nanotechnol       Date:  2011-10-30       Impact factor: 39.213

5.  Engineered Nanostructures of Haptens Lead to Unexpected Formation of Membrane Nanotubes Connecting Rat Basophilic Leukemia Cells.

Authors:  Jie-Ren Li; Shailise S Ross; Yang Liu; Ying X Liu; Kang-Hsin Wang; Huan-Yuan Chen; Fu-Tong Liu; Ted A Laurence; Gang-Yu Liu
Journal:  ACS Nano       Date:  2015-06-18       Impact factor: 15.881

6.  Organization, structure, and assembly of alpha-carboxysomes determined by electron cryotomography of intact cells.

Authors:  Cristina V Iancu; Dylan M Morris; Zhicheng Dou; Sabine Heinhorst; Gordon C Cannon; Grant J Jensen
Journal:  J Mol Biol       Date:  2009-11-17       Impact factor: 5.469

7.  Nonlinear scaling of surface water diffusion with bulk water viscosity of crowded solutions.

Authors:  John M Franck; John A Scott; Songi Han
Journal:  J Am Chem Soc       Date:  2013-03-11       Impact factor: 15.419

8.  Computational reconstruction of cell and tissue surfaces for modeling and data analysis.

Authors:  Frederick Klauschen; Hai Qi; Jackson G Egen; Ronald N Germain; Martin Meier-Schellersheim
Journal:  Nat Protoc       Date:  2009-06-04       Impact factor: 13.491

9.  Diffusive search and trajectories on tubular networks: a propagator approach.

Authors:  Zubenelgenubi C Scott; Aidan I Brown; Saurabh S Mogre; Laura M Westrate; Elena F Koslover
Journal:  Eur Phys J E Soft Matter       Date:  2021-06-18       Impact factor: 1.890

10.  Possible origin of life between mica sheets: does life imitate mica?

Authors:  Helen Greenwood Hansma
Journal:  J Biomol Struct Dyn       Date:  2012-09-11
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