Literature DB >> 18999449

Membrane mechanics as a probe of ion-channel gating mechanisms.

Daniel Reeves1, Tristan Ursell, Pierre Sens, Jane Kondev, Rob Phillips.   

Abstract

The details of conformational changes undergone by transmembrane ion channels in response to stimuli, such as electric fields and membrane tension, remain controversial. We approach this problem by considering how the conformational changes impose deformations in the lipid bilayer. We focus on the role of bilayer deformations in the context of voltage-gated channels because we hypothesize that such deformations are relevant in this case as well as for channels that are explicitly mechanosensitive. As a result of protein conformational changes, we predict that the lipid bilayer suffers deformations with a characteristic free-energy scale of 10 k{B}T . This free energy is comparable to the voltage-dependent part of the total gating energy, and we argue that these deformations could play an important role in the overall free-energy budget of gating. As a result, channel activity will depend upon mechanical membrane parameters such as tension and leaflet thickness. We further argue that the membrane deformation around any channel can be divided into three generic classes of deformation that exhibit different mechanosensitive properties. Finally, we provide the theoretical framework that relates conformational changes during gating to tension and leaflet thickness dependence in the critical gating voltage. This line of investigation suggests experiments that could discern the dominant deformation imposed upon the membrane as a result of channel gating, thus providing clues as to the channel deformation induced by the stimulus.

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Year:  2008        PMID: 18999449      PMCID: PMC3496789          DOI: 10.1103/PhysRevE.78.041901

Source DB:  PubMed          Journal:  Phys Rev E Stat Nonlin Soft Matter Phys        ISSN: 1539-3755


  58 in total

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2.  Stretch-activation and stretch-inactivation of Shaker-IR, a voltage-gated K+ channel.

Authors:  C X Gu; P F Juranka; C E Morris
Journal:  Biophys J       Date:  2001-06       Impact factor: 4.033

3.  Gating-by-tilt of mechanically sensitive membrane channels.

Authors:  Matthew S Turner; Pierre Sens
Journal:  Phys Rev Lett       Date:  2004-09-10       Impact factor: 9.161

4.  Assessment of potential stimuli for mechano-dependent gating of MscL: effects of pressure, tension, and lipid headgroups.

Authors:  Paul Moe; Paul Blount
Journal:  Biochemistry       Date:  2005-09-13       Impact factor: 3.162

5.  Theoretical analysis of hydrophobic matching and membrane-mediated interactions in lipid bilayers containing gramicidin.

Authors:  T A Harroun; W T Heller; T M Weiss; L Yang; H W Huang
Journal:  Biophys J       Date:  1999-06       Impact factor: 4.033

6.  Energetic and spatial parameters for gating of the bacterial large conductance mechanosensitive channel, MscL.

Authors:  S I Sukharev; W J Sigurdson; C Kung; F Sachs
Journal:  J Gen Physiol       Date:  1999-04       Impact factor: 4.086

7.  Effect of chain length and unsaturation on elasticity of lipid bilayers.

Authors:  W Rawicz; K C Olbrich; T McIntosh; D Needham; E Evans
Journal:  Biophys J       Date:  2000-07       Impact factor: 4.033

8.  Physical principles underlying the transduction of bilayer deformation forces during mechanosensitive channel gating.

Authors:  Eduardo Perozo; Anna Kloda; D Marien Cortes; Boris Martinac
Journal:  Nat Struct Biol       Date:  2002-09

Review 9.  Lipid-protein interactions in biological membranes: a structural perspective.

Authors:  A G Lee
Journal:  Biochim Biophys Acta       Date:  2003-05-02

10.  Curvature and bending constants for phosphatidylserine-containing membranes.

Authors:  Nola Fuller; Carlos R Benatti; R Peter Rand
Journal:  Biophys J       Date:  2003-09       Impact factor: 4.033

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  29 in total

1.  Electroelastic coupling between membrane surface fluctuations and membrane-embedded charges: continuum multidielectric treatment.

Authors:  Gennady V Miloshevsky; Ahmed Hassanein; Michael B Partenskii; Peter C Jordan
Journal:  J Chem Phys       Date:  2010-06-21       Impact factor: 3.488

Review 2.  Toward understanding protocell mechanosensation.

Authors:  Daniel Balleza
Journal:  Orig Life Evol Biosph       Date:  2010-11-17       Impact factor: 1.950

3.  Computational Optogenetics: A Novel Continuum Framework for the Photoelectrochemistry of Living Systems.

Authors:  Jonathan Wong; Oscar J Abilez; Ellen Kuhl
Journal:  J Mech Phys Solids       Date:  2012-06-01       Impact factor: 5.471

4.  Constitutive boost of a K+ channel via inherent bilayer tension and a unique tension-dependent modality.

Authors:  Masayuki Iwamoto; Shigetoshi Oiki
Journal:  Proc Natl Acad Sci U S A       Date:  2018-12-03       Impact factor: 11.205

Review 5.  Feeling the hidden mechanical forces in lipid bilayer is an original sense.

Authors:  Andriy Anishkin; Stephen H Loukin; Jinfeng Teng; Ching Kung
Journal:  Proc Natl Acad Sci U S A       Date:  2014-05-21       Impact factor: 11.205

6.  Mechanosensitive closed-closed transitions in large membrane proteins: osmoprotection and tension damping.

Authors:  Pierre-Alexandre Boucher; Catherine E Morris; Béla Joós
Journal:  Biophys J       Date:  2009-11-18       Impact factor: 4.033

Review 7.  Curvature-driven lipid sorting in biomembranes.

Authors:  Andrew Callan-Jones; Benoit Sorre; Patricia Bassereau
Journal:  Cold Spring Harb Perspect Biol       Date:  2011-02-01       Impact factor: 10.005

8.  Protein shape change has a major effect on the gating energy of a mechanosensitive channel.

Authors:  O H Samuli Ollila; Martti Louhivuori; Siewert J Marrink; Ilpo Vattulainen
Journal:  Biophys J       Date:  2011-04-06       Impact factor: 4.033

Review 9.  The mechanobiology of brain function.

Authors:  William J Tyler
Journal:  Nat Rev Neurosci       Date:  2012-12       Impact factor: 34.870

10.  A competing hydrophobic tug on L596 to the membrane core unlatches S4-S5 linker elbow from TRP helix and allows TRPV4 channel to open.

Authors:  Jinfeng Teng; Stephen H Loukin; Andriy Anishkin; Ching Kung
Journal:  Proc Natl Acad Sci U S A       Date:  2016-10-03       Impact factor: 11.205

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