Literature DB >> 18999304

A multi-level spatial clustering algorithm for detection of disease outbreaks.

Jialan Que1, Fu-Chiang Tsui.   

Abstract

In this paper, we proposed a Multi-level Spatial Clustering (MSC) algorithm for rapid detection of emerging disease outbreaks prospectively. We used the semi-synthetic data for algorithm evaluation. We applied BARD algorithm [1] to generate outbreak counts for simulation of aerosol release of Anthrax. We compared MSC with two spatial clustering algorithms: Kulldorff's spatial scan statistic [2] and Bayesian spatial scan statistic [3]. The evaluation results showed that the areas under ROC had no significant difference among the three algorithms, so did the areas under AMOC. MSC demonstrated significant computational efficiency (100 + times faster) and higher PPV. However, MSC showed 2-6 hours delay on average for outbreak detection when the false alarm rate was lower than 1 false alarm per 4 weeks. We concluded that the MSC algorithm is computationally efficient and it is able to provide more precise and compact clusters in a timely manner while keeping high detection accuracy (cluster sensitivity) and low false alarm rates.

Entities:  

Mesh:

Year:  2008        PMID: 18999304      PMCID: PMC2655962     

Source DB:  PubMed          Journal:  AMIA Annu Symp Proc        ISSN: 1559-4076


  4 in total

1.  A test for spatial disease clustering adjusted for multiple testing.

Authors:  T Tango
Journal:  Stat Med       Date:  2000-01-30       Impact factor: 2.373

2.  Detection of outbreaks from time series data using wavelet transform.

Authors:  Jun Zhang; Fu -Chiang Tsui; Michael M Wagner; William R Hogan
Journal:  AMIA Annu Symp Proc       Date:  2003

3.  Algorithms for rapid outbreak detection: a research synthesis.

Authors:  David L Buckeridge; Howard Burkom; Murray Campbell; William R Hogan; Andrew W Moore
Journal:  J Biomed Inform       Date:  2005-04       Impact factor: 6.317

4.  The Bayesian aerosol release detector: an algorithm for detecting and characterizing outbreaks caused by an atmospheric release of Bacillus anthracis.

Authors:  William R Hogan; Gregory F Cooper; Garrick L Wallstrom; Michael M Wagner; Jean-Marc Depinay
Journal:  Stat Med       Date:  2007-12-20       Impact factor: 2.373

  4 in total
  3 in total

1.  Rank-based spatial clustering: an algorithm for rapid outbreak detection.

Authors:  Jialan Que; Fu-Chiang Tsui
Journal:  J Am Med Inform Assoc       Date:  2011-05-01       Impact factor: 4.497

2.  Evaluating the utility of syndromic surveillance algorithms for screening to detect potentially clonal hospital infection outbreaks.

Authors:  Randy J Carnevale; Thomas R Talbot; William Schaffner; Karen C Bloch; Titus L Daniels; Randolph A Miller
Journal:  J Am Med Inform Assoc       Date:  2011-05-23       Impact factor: 4.497

3.  Spatial and Temporal Algorithm Evaluation for Detecting Over-The-Counter Thermometer Sale Increases during 2009 H1N1 Pandemic.

Authors:  Jialan Que; Fu-Chiang Tsui
Journal:  Online J Public Health Inform       Date:  2012-05-17
  3 in total

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