Literature DB >> 18999255

Somatic mutation signatures of cancer.

Stephen R Piccolo1, Lewis J Frey.   

Abstract

The advancement of cancer diagnosis, prognosis, and treatment would be hastened via a robust method to identify patterns that indicate a tumor's state. Prior research has established that sporadic, colorectal-cancer pathogenesis involves a series of genetic mutations that allow benign polyps to develop and eventually progress to malignant tumors in distinguishable patterns. Using a publicly available database of somatic mutations for many cancer types, we identified somatic-mutation signatures. Our results for colorectal cancer are consistent with what extant biological models as described in the literature. This approach is potentially useful for identifying previously undiscovered patterns and generating hypotheses related to biological pathways. Such signatures could prove valuable for eventual translation into clinical practice.

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Year:  2008        PMID: 18999255      PMCID: PMC2655983     

Source DB:  PubMed          Journal:  AMIA Annu Symp Proc        ISSN: 1559-4076


  12 in total

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8.  The genomic landscapes of human breast and colorectal cancers.

Authors:  Laura D Wood; D Williams Parsons; Siân Jones; Jimmy Lin; Tobias Sjöblom; Rebecca J Leary; Dong Shen; Simina M Boca; Thomas Barber; Janine Ptak; Natalie Silliman; Steve Szabo; Zoltan Dezso; Vadim Ustyanksky; Tatiana Nikolskaya; Yuri Nikolsky; Rachel Karchin; Paul A Wilson; Joshua S Kaminker; Zemin Zhang; Randal Croshaw; Joseph Willis; Dawn Dawson; Michail Shipitsin; James K V Willson; Saraswati Sukumar; Kornelia Polyak; Ben Ho Park; Charit L Pethiyagoda; P V Krishna Pant; Dennis G Ballinger; Andrew B Sparks; James Hartigan; Douglas R Smith; Erick Suh; Nickolas Papadopoulos; Phillip Buckhaults; Sanford D Markowitz; Giovanni Parmigiani; Kenneth W Kinzler; Victor E Velculescu; Bert Vogelstein
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  1 in total

1.  Multiplicity: an organizing principle for cancers and somatic mutations.

Authors:  Lewis J Frey; Stephen R Piccolo; Mary E Edgerton
Journal:  BMC Med Genomics       Date:  2011-06-29       Impact factor: 3.063

  1 in total

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