Literature DB >> 18998933

Using multi-terminology indexing for the assignment of MeSH descriptors to health resources in a French online catalogue.

Suzanne Pereira1, Aurélie Névéol, Gaétan Kerdelhué, Elisabeth Serrot, Michel Joubert, Stéfan J Darmoni.   

Abstract

BACKGROUND: To assist with the development of a French online quality-controlled health gateway(CISMeF), an automatic indexing tool assigning MeSH descriptors to medical text in French was created. The French Multi-Terminology Indexer (FMTI) relies on a multi-terminology approach involving four prominent medical terminologies and the mappings between them.
OBJECTIVE: In this paper,we compare lemmatization and stemming as methods to process French medical text for indexing. We also evaluate the multi-terminology approach implemented in F-MTI.
METHODS: The indexing strategies were assessed on a corpus of 18,814 resources indexed manually.
RESULTS: There is little difference in the indexing performance when lemmatization or stemming is used. However, the multi-terminology approach outperforms indexing relying on a single terminology in terms of recall.
CONCLUSION: F-MTI will soon be used in the CISMeF production environment and in a Health MultiTerminology Server in French.

Mesh:

Year:  2008        PMID: 18998933      PMCID: PMC2656077     

Source DB:  PubMed          Journal:  AMIA Annu Symp Proc        ISSN: 1559-4076


  5 in total

1.  Effective mapping of biomedical text to the UMLS Metathesaurus: the MetaMap program.

Authors:  A R Aronson
Journal:  Proc AMIA Symp       Date:  2001

2.  The NLM Indexing Initiative's Medical Text Indexer.

Authors:  Alan R Aronson; James G Mork; Clifford W Gay; Susanne M Humphrey; Willie J Rogers
Journal:  Stud Health Technol Inform       Date:  2004

3.  Enhancing the MeSH thesaurus to retrieve French online health resources in a quality-controlled gateway.

Authors:  Magaly Douyère; Lina F Soualmia; Aurélie Névéol; Alexandrina Rogozan; Badisse Dahamna; Jean-Philippe Leroy; Benoît Thirion; Stefan J Darmoni
Journal:  Health Info Libr J       Date:  2004-12

4.  Evaluation of a simple method for the automatic assignment of MeSH descriptors to health resources in a French online catalogue.

Authors:  Aurélie Névéol; Suzanne Pereira; Gaetan Kerdelhué; Badisse Dahamna; Michel Joubert; Stéfan J Darmoni
Journal:  Stud Health Technol Inform       Date:  2007

5.  Beyond synonymy: exploiting the UMLS semantics in mapping vocabularies.

Authors:  O Bodenreider; S J Nelson; W T Hole; H F Chang
Journal:  Proc AMIA Symp       Date:  1998
  5 in total
  5 in total

1.  Multi-terminology indexing for the assignment of MeSH descriptors to medical abstracts in French.

Authors:  Suzanne Pereira; Saoussen Sakji; Aurélie Névéol; Ivan Kergourlay; Gaétan Kerdelhué; Elisabeth Serrot; Michel Joubert; Stéfan J Darmoni
Journal:  AMIA Annu Symp Proc       Date:  2009-11-14

2.  Evaluation of natural language processing from emergency department computerized medical records for intra-hospital syndromic surveillance.

Authors:  Solweig Gerbier; Olga Yarovaya; Quentin Gicquel; Anne-Laure Millet; Véronique Smaldore; Véronique Pagliaroli; Stefan Darmoni; Marie-Hélène Metzger
Journal:  BMC Med Inform Decis Mak       Date:  2011-07-28       Impact factor: 2.796

3.  Improving information retrieval with multiple health terminologies in a quality-controlled gateway.

Authors:  Lina F Soualmia; Saoussen Sakji; Catherine Letord; Laetitia Rollin; Philippe Massari; Stéfan J Darmoni
Journal:  Health Inf Sci Syst       Date:  2013-02-04

4.  Evaluation of syndromic algorithms for detecting patients with potentially transmissible infectious diseases based on computerised emergency-department data.

Authors:  Solweig Gerbier-Colomban; Quentin Gicquel; Anne-Laure Millet; Christophe Riou; Jacqueline Grando; Stefan Darmoni; Véronique Potinet-Pagliaroli; Marie-Hélène Metzger
Journal:  BMC Med Inform Decis Mak       Date:  2013-09-03       Impact factor: 2.796

5.  Terminology extraction from medical texts in Polish.

Authors:  Małgorzata Marciniak; Agnieszka Mykowiecka
Journal:  J Biomed Semantics       Date:  2014-05-31
  5 in total

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