Literature DB >> 18997321

Rv0802c from Mycobacterium tuberculosis: the first structure of a succinyltransferase with the GNAT fold.

Matthew W Vetting1, James C Errey, John S Blanchard.   

Abstract

Gene rv0802c from Mycobacterium tuberculosis encodes a 218-amino-acid protein and is annotated as a hypothetical protein with homology to GCN5-related N-acetyltransferases. The structure of Rv0802c was determined in an unliganded form to 2.0 A resolution utilizing single-wavelength anomalous dispersion from a samarium soak that resulted in a single bound Sm(3+):citrate(2) complex. The structure confirms that Rv0802c exhibits the GCN5-related N-acetyltransferase fold and revealed a tetramer composed of a dimer of dimers with approximate 222 symmetry. In addition, a bound acetate ion indicated that Rv0802c may utilize a unique acyl donor for the family. The subsequent determination of the structure of Rv0802c in complex with succinyl-CoA to 2.3 A resolution suggests that Rv0802c is the first known GCN5-related N-acetyltransferase family member to utilize succinyl-CoA as a substrate.

Entities:  

Mesh:

Substances:

Year:  2008        PMID: 18997321      PMCID: PMC2581710          DOI: 10.1107/S1744309108031679

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  30 in total

Review 1.  Databases in protein crystallography.

Authors:  G J Kleywegt; T A Jones
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  1998-11-01

2.  Aminoglycoside 2'-N-acetyltransferase from Mycobacterium tuberculosis in complex with coenzyme A and aminoglycoside substrates.

Authors:  Matthew W Vetting; Subray S Hegde; Farah Javid-Majd; John S Blanchard; Steven L Roderick
Journal:  Nat Struct Biol       Date:  2002-09

3.  Automated structure solution, density modification and model building.

Authors:  Thomas C Terwilliger
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2002-10-21

4.  A new software routine that automates the fitting of protein X-ray crystallographic electron-density maps.

Authors:  D G Levitt
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2001-06-21

5.  Use of TLS parameters to model anisotropic displacements in macromolecular refinement.

Authors:  M D Winn; M N Isupov; G N Murshudov
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2001-01

6.  Identification of the mycothiol synthase gene (mshD) encoding the acetyltransferase producing mycothiol in actinomycetes.

Authors:  Teresa Koledin; Gerald L Newton; Robert C Fahey
Journal:  Arch Microbiol       Date:  2002-08-15       Impact factor: 2.552

Review 7.  GCN5-related N-acetyltransferases: a structural overview.

Authors:  F Dyda; D C Klein; A B Hickman
Journal:  Annu Rev Biophys Biomol Struct       Date:  2000

8.  Crystal structure of the histone acetyltransferase Hpa2: A tetrameric member of the Gcn5-related N-acetyltransferase superfamily.

Authors:  M L Angus-Hill; R N Dutnall; S T Tafrov; R Sternglanz; V Ramakrishnan
Journal:  J Mol Biol       Date:  1999-12-17       Impact factor: 5.469

9.  X-ray structure of the AAC(6')-Ii antibiotic resistance enzyme at 1.8 A resolution; examination of oligomeric arrangements in GNAT superfamily members.

Authors:  David L Burk; Navleen Ghuman; Leanne E Wybenga-Groot; Albert M Berghuis
Journal:  Protein Sci       Date:  2003-03       Impact factor: 6.725

10.  Crystal structure of tabtoxin resistance protein complexed with acetyl coenzyme A reveals the mechanism for beta-lactam acetylation.

Authors:  Hongzhen He; Yi Ding; Mark Bartlam; Fei Sun; Yi Le; Xincheng Qin; Hong Tang; Rongguang Zhang; Andrzej Joachimiak; Jinyuan Liu; Nanming Zhao; Zihe Rao
Journal:  J Mol Biol       Date:  2003-01-31       Impact factor: 5.469

View more
  13 in total

1.  cAMP-regulated protein lysine acetylases in mycobacteria.

Authors:  Subhalaxmi Nambi; Nirmalya Basu; Sandhya S Visweswariah
Journal:  J Biol Chem       Date:  2010-05-27       Impact factor: 5.157

2.  Systematic Analysis of Mycobacterial Acylation Reveals First Example of Acylation-mediated Regulation of Enzyme Activity of a Bacterial Phosphatase.

Authors:  Anshika Singhal; Gunjan Arora; Richa Virmani; Parijat Kundu; Tanya Khanna; Andaleeb Sajid; Richa Misra; Jayadev Joshi; Vikas Yadav; Sintu Samanta; Neeru Saini; Amit K Pandey; Sandhya S Visweswariah; Christian Hentschker; Dörte Becher; Ulf Gerth; Yogendra Singh
Journal:  J Biol Chem       Date:  2015-09-08       Impact factor: 5.157

Review 3.  More than cholesterol catabolism: regulatory vulnerabilities in Mycobacterium tuberculosis.

Authors:  Amber C Bonds; Nicole S Sampson
Journal:  Curr Opin Chem Biol       Date:  2018-06-12       Impact factor: 8.822

4.  Bm-iAANAT3: Expression and characterization of a novel arylalkylamine N-acyltransferase from Bombyx mori.

Authors:  Matthew R Battistini; Brian G O'Flynn; Christopher Shoji; Gabriela Suarez; Lamar C Galloway; David J Merkler
Journal:  Arch Biochem Biophys       Date:  2018-11-16       Impact factor: 4.013

5.  Repurposing the GNAT Fold in the Initiation of Polyketide Biosynthesis.

Authors:  Meredith A Skiba; Collin L Tran; Qingyun Dan; Andrew P Sikkema; Zachary Klaver; William H Gerwick; David H Sherman; Janet L Smith
Journal:  Structure       Date:  2019-11-27       Impact factor: 5.006

Review 6.  Bacterial GCN5-Related N-Acetyltransferases: From Resistance to Regulation.

Authors:  Lorenza Favrot; John S Blanchard; Olivia Vergnolle
Journal:  Biochemistry       Date:  2016-02-09       Impact factor: 3.162

7.  Post-translational Succinylation of Mycobacterium tuberculosis Enoyl-CoA Hydratase EchA19 Slows Catalytic Hydration of Cholesterol Catabolite 3-Oxo-chol-4,22-diene-24-oyl-CoA.

Authors:  Amber C Bonds; Tianao Yuan; Joshua M Werman; Jungwon Jang; Rui Lu; Natasha M Nesbitt; Miguel Garcia-Diaz; Nicole S Sampson
Journal:  ACS Infect Dis       Date:  2020-07-27       Impact factor: 5.084

8.  UniDrug-target: a computational tool to identify unique drug targets in pathogenic bacteria.

Authors:  Sree Krishna Chanumolu; Chittaranjan Rout; Rajinder S Chauhan
Journal:  PLoS One       Date:  2012-03-14       Impact factor: 3.240

Review 9.  The N-Acetylglutamate Synthase Family: Structures, Function and Mechanisms.

Authors:  Dashuang Shi; Norma M Allewell; Mendel Tuchman
Journal:  Int J Mol Sci       Date:  2015-06-09       Impact factor: 5.923

10.  Crystal structures of malonyl-coenzyme A decarboxylase provide insights into its catalytic mechanism and disease-causing mutations.

Authors:  D Sean Froese; Farhad Forouhar; Timothy H Tran; Melanie Vollmar; Yi Seul Kim; Scott Lew; Helen Neely; Jayaraman Seetharaman; Yang Shen; Rong Xiao; Thomas B Acton; John K Everett; Giuseppe Cannone; Sriharsha Puranik; Pavel Savitsky; Tobias Krojer; Ewa S Pilka; Wasim Kiyani; Wen Hwa Lee; Brian D Marsden; Frank von Delft; Charles K Allerston; Laura Spagnolo; Opher Gileadi; Gaetano T Montelione; Udo Oppermann; Wyatt W Yue; Liang Tong
Journal:  Structure       Date:  2013-06-20       Impact factor: 5.006

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.