Literature DB >> 18992256

Crystal structures of protein phosphatase-1 bound to nodularin-R and tautomycin: a novel scaffold for structure-based drug design of serine/threonine phosphatase inhibitors.

Matthew S Kelker1, Rebecca Page, Wolfgang Peti.   

Abstract

Protein phosphatase 1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Many naturally occurring, molecular toxins modulate PP1 activity, though the exact mechanism of this differential regulation is not understood. A detailed elucidation of these interactions is crucial for understanding the cellular basis of phosphatase function and signaling pathways but, more importantly, they can serve as the basis for highly specific therapeutics, e.g. against cancer. We report the crystal structures of PP1 in complex with nodularin-R at 1.63 A and tautomycin at 1.70 A resolution. The PP1:nodularin-R complex was used to demonstrate the utility of our improved PP1 production technique, which produces highly active, soluble PP1. Tautomycin is one of the few toxins that reportedly preferentially binds PP1>PP2A. Therefore, the PP1:tautomycin structure is the first complex structure with a toxin with preferred PP1 specificity. Furthermore, since tautomycin is a linear non-peptide-based toxin, our reported structure will aid the design of lead compounds for novel PP1-specific pharmaceuticals.

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Year:  2008        PMID: 18992256      PMCID: PMC2652124          DOI: 10.1016/j.jmb.2008.10.053

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  45 in total

Review 1.  Serine-threonine protein phosphatase inhibitors: development of potential therapeutic strategies.

Authors:  Adam McCluskey; Alistair T R Sim; Jennette A Sakoff
Journal:  J Med Chem       Date:  2002-03-14       Impact factor: 7.446

2.  PRODRG: a tool for high-throughput crystallography of protein-ligand complexes.

Authors:  Alexander W Schüttelkopf; Daan M F van Aalten
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2004-07-21

Review 3.  Protein phosphatase inhibition: structure based design. Towards new therapeutic agents.

Authors:  Jennette A Sakoff; Adam McCluskey
Journal:  Curr Pharm Des       Date:  2004       Impact factor: 3.116

4.  WHAT IF: a molecular modeling and drug design program.

Authors:  G Vriend
Journal:  J Mol Graph       Date:  1990-03

5.  Structure of the protein phosphatase 2A holoenzyme.

Authors:  Yanhui Xu; Yongna Xing; Yu Chen; Yang Chao; Zheng Lin; Eugene Fan; Jong W Yu; Stefan Strack; Philip D Jeffrey; Yigong Shi
Journal:  Cell       Date:  2006-12-15       Impact factor: 41.582

Review 6.  Natural products as a robust source of new drugs and drug leads: past successes and present day issues.

Authors:  Gilbert M Rishton
Journal:  Am J Cardiol       Date:  2008-05-22       Impact factor: 2.778

7.  A model for binding of structurally diverse natural product inhibitors of protein phosphatases PP1 and PP2A.

Authors:  V Gupta; A K Ogawa; X Du; K N Houk; R W Armstrong
Journal:  J Med Chem       Date:  1997-09-26       Impact factor: 7.446

8.  Three-dimensional structure of the catalytic subunit of protein serine/threonine phosphatase-1.

Authors:  J Goldberg; H B Huang; Y G Kwon; P Greengard; A C Nairn; J Kuriyan
Journal:  Nature       Date:  1995-08-31       Impact factor: 49.962

Review 9.  Molecular enzymology underlying regulation of protein phosphatase-1 by natural toxins.

Authors:  C F B Holmes; J T Maynes; K R Perreault; J F Dawson; M N G James
Journal:  Curr Med Chem       Date:  2002-11       Impact factor: 4.530

Review 10.  Medical uses of mylabris in ancient China and recent studies.

Authors:  G S Wang
Journal:  J Ethnopharmacol       Date:  1989-09       Impact factor: 4.360

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  46 in total

1.  Functional characterization of TtnD and TtnF, unveiling new insights into tautomycetin biosynthesis.

Authors:  Yinggang Luo; Wenli Li; Jianhua Ju; Qiuping Yuan; Noel R Peters; F Michael Hoffmann; Sheng-Xiong Huang; Tim S Bugni; Scott Rajski; Hiroyuki Osada; Ben Shen
Journal:  J Am Chem Soc       Date:  2010-05-19       Impact factor: 15.419

Review 2.  Structural basis for protein phosphatase 1 regulation and specificity.

Authors:  Wolfgang Peti; Angus C Nairn; Rebecca Page
Journal:  FEBS J       Date:  2012-02-24       Impact factor: 5.542

3.  In vitro reconstitution of a CaMKII memory switch by an NMDA receptor-derived peptide.

Authors:  Hidetoshi Urakubo; Miharu Sato; Shin Ishii; Shinya Kuroda
Journal:  Biophys J       Date:  2014-03-18       Impact factor: 4.033

4.  PER2 Differentially Regulates Clock Phosphorylation versus Transcription by Reciprocal Switching of CK1ε Activity.

Authors:  Ximing Qin; Tetsuya Mori; Yunfei Zhang; Carl Hirschie Johnson
Journal:  J Biol Rhythms       Date:  2015-06       Impact factor: 3.182

5.  Greatwall-phosphorylated Endosulfine is both an inhibitor and a substrate of PP2A-B55 heterotrimers.

Authors:  Byron C Williams; Joshua J Filter; Kristina A Blake-Hodek; Brian E Wadzinski; Nicholas J Fuda; David Shalloway; Michael L Goldberg
Journal:  Elife       Date:  2014-03-11       Impact factor: 8.140

Review 6.  The extended PP1 toolkit: designed to create specificity.

Authors:  Mathieu Bollen; Wolfgang Peti; Michael J Ragusa; Monique Beullens
Journal:  Trends Biochem Sci       Date:  2010-05-01       Impact factor: 13.807

7.  Deprotonation states of the two active site water molecules regulate the binding of protein phosphatase 5 with its substrate: A molecular dynamics study.

Authors:  Lingyun Wang; Feng Yan
Journal:  Protein Sci       Date:  2017-07-28       Impact factor: 6.725

Review 8.  On the chemistry, toxicology and genetics of the cyanobacterial toxins, microcystin, nodularin, saxitoxin and cylindrospermopsin.

Authors:  Leanne Pearson; Troco Mihali; Michelle Moffitt; Ralf Kellmann; Brett Neilan
Journal:  Mar Drugs       Date:  2010-05-10       Impact factor: 5.118

9.  Spinophilin directs protein phosphatase 1 specificity by blocking substrate binding sites.

Authors:  Michael J Ragusa; Barbara Dancheck; David A Critton; Angus C Nairn; Rebecca Page; Wolfgang Peti
Journal:  Nat Struct Mol Biol       Date:  2010-03-21       Impact factor: 15.369

10.  Functional characterization of ttmM unveils new tautomycin analogs and insight into tautomycin biosynthesis and activity.

Authors:  Jianhua Ju; Wenli Li; Qiuping Yuan; Noel R Peters; F Michael Hoffmann; Scott R Rajski; Hiroyuki Osada; Ben Shen
Journal:  Org Lett       Date:  2009-04-02       Impact factor: 6.005

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