Literature DB >> 1899140

Role of a carboxyl-terminal helix in the assembly, interchain interactions, and stability of aspartate transcarbamoylase.

C B Peterson1, H K Schachman.   

Abstract

The six individual catalytic polypeptide chains within the two catalytic trimers of Escherichia coli aspartate transcarbamoylase (ATCase; EC 2.1.3.2) are folded into two discrete structural domains interconnected in part by helix 12, which comprises residues 285-305 and is located near the carboxyl terminus of the chain. The essential role of this helix in folding of the chains and their assembly into ATCase was demonstrated by introducing a stop codon at the position corresponding to amino acid 284, 291, or 299. Cells containing these mutations are pyrimidine auxotrophs lacking ATCase-like protein in cell extracts. In contrast, stable active enzyme is formed from chains truncated at position 306 or 307, showing that all 310 amino acids are not required for assembly. Replacements of Gln-288, Asn-291, Arg-296, and Ala-298 were introduced to assess the effect of alterations within helix 12 on protein stability. Stability of the trimers was measured both by differential scanning microcalorimetry and by the rate of exchange of chains at 4 degrees C when mutant trimers were incubated with succinylated wild-type trimers. Melting temperatures of the mutant trimers spanned a range of more than 20 degrees C, with a few higher and others lower than that of wild-type trimers. Large changes in interchain interaction energies were observed for the trimers, but there was no direct correlation between the ease of dissociation of the trimers and their thermal stability. Calorimetry on the mutant holoenzymes revealed alterations in the interactions between trimers and regulatory subunits within the intact enzymes. The striking changes in stability of both trimers and holoenzymes demonstrated that effects of relatively localized amino acid replacements in helix 12 are manifested by indirect global alterations propagated throughout the structure.

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Year:  1991        PMID: 1899140      PMCID: PMC50830          DOI: 10.1073/pnas.88.2.458

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  36 in total

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2.  Hybridization as a technique for studying interchain interactions in the catalytic trimers of aspartate transcarbamoylase.

Authors:  Y R Yang; H K Schachman
Journal:  Anal Biochem       Date:  1987-05-15       Impact factor: 3.365

Review 3.  Can a simple model account for the allosteric transition of aspartate transcarbamoylase?

Authors:  H K Schachman
Journal:  J Biol Chem       Date:  1988-12-15       Impact factor: 5.157

4.  Differential scanning calorimetric study of the thermal denaturation of aspartate transcarbamoylase of Escherichia coli.

Authors:  V Edge; N M Allewell; J M Sturtevant
Journal:  Biochemistry       Date:  1988-10-18       Impact factor: 3.162

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Journal:  Nature       Date:  1970-08-15       Impact factor: 49.962

6.  Complex of N-phosphonacetyl-L-aspartate with aspartate carbamoyltransferase. X-ray refinement, analysis of conformational changes and catalytic and allosteric mechanisms.

Authors:  H M Ke; W N Lipscomb; Y J Cho; R B Honzatko
Journal:  J Mol Biol       Date:  1988-12-05       Impact factor: 5.469

Review 7.  Escherichia coli aspartate transcarbamylase: the relation between structure and function.

Authors:  E R Kantrowitz; W N Lipscomb
Journal:  Science       Date:  1988-08-05       Impact factor: 47.728

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Authors:  C G Lerner; R L Switzer
Journal:  J Biol Chem       Date:  1986-08-25       Impact factor: 5.157

9.  Construction of a cDNA to the hamster CAD gene and its application toward defining the domain for aspartate transcarbamylase.

Authors:  K Shigesada; G R Stark; J A Maley; L A Niswander; J N Davidson
Journal:  Mol Cell Biol       Date:  1985-07       Impact factor: 4.272

10.  The rudimentary gene of Drosophila melanogaster encodes four enzymic functions.

Authors:  J N Freund; B P Jarry
Journal:  J Mol Biol       Date:  1987-01-05       Impact factor: 5.469

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  9 in total

1.  Random circular permutation leading to chain disruption within and near alpha helices in the catalytic chains of aspartate transcarbamoylase: effects on assembly, stability, and function.

Authors:  P T Beernink; Y R Yang; R Graf; D S King; S S Shah; H K Schachman
Journal:  Protein Sci       Date:  2001-03       Impact factor: 6.725

2.  In vivo assembly of aspartate transcarbamoylase from fragmented and circularly permuted catalytic polypeptide chains.

Authors:  X Ni; H K Schachman
Journal:  Protein Sci       Date:  2001-03       Impact factor: 6.725

3.  Random circular permutation of genes and expressed polypeptide chains: application of the method to the catalytic chains of aspartate transcarbamoylase.

Authors:  R Graf; H K Schachman
Journal:  Proc Natl Acad Sci U S A       Date:  1996-10-15       Impact factor: 11.205

4.  Aspartate transcarbamoylase containing circularly permuted catalytic polypeptide chains.

Authors:  Y R Yang; H K Schachman
Journal:  Proc Natl Acad Sci U S A       Date:  1993-12-15       Impact factor: 11.205

5.  Reconstitution of active catalytic trimer of aspartate transcarbamoylase from proteolytically cleaved polypeptide chains.

Authors:  V M Powers; Y R Yang; M J Fogli; H K Schachman
Journal:  Protein Sci       Date:  1993-06       Impact factor: 6.725

6.  Molecular cloning and characterization of the pyrB1 and pyrB2 genes encoding aspartate transcarbamoylase in pea (Pisum sativum L.).

Authors:  C L Williamson; R D Slocum
Journal:  Plant Physiol       Date:  1994-05       Impact factor: 8.340

7.  In vivo formation of allosteric aspartate transcarbamoylase containing circularly permuted catalytic polypeptide chains: implications for protein folding and assembly.

Authors:  P Zhang; H K Schachman
Journal:  Protein Sci       Date:  1996-07       Impact factor: 6.725

8.  Structural similarity between ornithine and aspartate transcarbamoylases of Escherichia coli: implications for domain switching.

Authors:  L B Murata; H K Schachman
Journal:  Protein Sci       Date:  1996-04       Impact factor: 6.725

Review 9.  Functions of the gene products of Escherichia coli.

Authors:  M Riley
Journal:  Microbiol Rev       Date:  1993-12
  9 in total

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