Literature DB >> 18990708

Copy number variation and schizophrenia.

David St Clair1.   

Abstract

Over the last 12 months, a series of major articles have reported associations with schizophrenia of copy number variants at 1q21, 15q11.2, 15q13.3, 16p11.2, 22q12, and Neurexin 1 loci. These are rare high-penetrant mutations that increase risk not only of schizophrenia but also of a range of other psychiatric disorders including autism and mental retardation. In some cases, the same phenotype can occur irrespective of whether the copy number variant causes a deletion or duplication. Some of these mutations occur at very high rates in human populations, but because of reduced fecundity associated with major psychiatric disorders the overall frequency in the population remains low. These new findings raise fundamental clinical and scientific questions concerning classification of major neuropsychiatric disorders, modes of inheritance, diagnostics, and genetic counseling. Although the loci identified so far account for only a small proportion of cases, many more are likely to be discovered over the next few years. A major focus of research will be to identify the key, the genetic and environmental determinants of schizophrenia risk in carriers of these copy number variants, and to discover whether their rates of mutation are unstable or fixed.

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Year:  2008        PMID: 18990708      PMCID: PMC2643970          DOI: 10.1093/schbul/sbn147

Source DB:  PubMed          Journal:  Schizophr Bull        ISSN: 0586-7614            Impact factor:   9.306


  28 in total

1.  Structural variation of chromosomes in autism spectrum disorder.

Authors:  Christian R Marshall; Abdul Noor; John B Vincent; Anath C Lionel; Lars Feuk; Jennifer Skaug; Mary Shago; Rainald Moessner; Dalila Pinto; Yan Ren; Bhooma Thiruvahindrapduram; Andreas Fiebig; Stefan Schreiber; Jan Friedman; Cees E J Ketelaars; Yvonne J Vos; Can Ficicioglu; Susan Kirkpatrick; Rob Nicolson; Leon Sloman; Anne Summers; Clare A Gibbons; Ahmad Teebi; David Chitayat; Rosanna Weksberg; Ann Thompson; Cathy Vardy; Vicki Crosbie; Sandra Luscombe; Rebecca Baatjes; Lonnie Zwaigenbaum; Wendy Roberts; Bridget Fernandez; Peter Szatmari; Stephen W Scherer
Journal:  Am J Hum Genet       Date:  2008-01-17       Impact factor: 11.025

2.  Comparative genome hybridization suggests a role for NRXN1 and APBA2 in schizophrenia.

Authors:  George Kirov; Dilihan Gumus; Wei Chen; Nadine Norton; Lyudmila Georgieva; Murat Sari; Michael C O'Donovan; Fikret Erdogan; Michael J Owen; Hans-Hilger Ropers; Reinhard Ullmann
Journal:  Hum Mol Genet       Date:  2007-11-06       Impact factor: 6.150

3.  Rare structural variants disrupt multiple genes in neurodevelopmental pathways in schizophrenia.

Authors:  Tom Walsh; Jon M McClellan; Shane E McCarthy; Anjené M Addington; Sarah B Pierce; Greg M Cooper; Alex S Nord; Mary Kusenda; Dheeraj Malhotra; Abhishek Bhandari; Sunday M Stray; Caitlin F Rippey; Patricia Roccanova; Vlad Makarov; B Lakshmi; Robert L Findling; Linmarie Sikich; Thomas Stromberg; Barry Merriman; Nitin Gogtay; Philip Butler; Kristen Eckstrand; Laila Noory; Peter Gochman; Robert Long; Zugen Chen; Sean Davis; Carl Baker; Evan E Eichler; Paul S Meltzer; Stanley F Nelson; Andrew B Singleton; Ming K Lee; Judith L Rapoport; Mary-Claire King; Jonathan Sebat
Journal:  Science       Date:  2008-03-27       Impact factor: 47.728

4.  Disruption of neurexin 1 associated with autism spectrum disorder.

Authors:  Hyung-Goo Kim; Shotaro Kishikawa; Anne W Higgins; Ihn-Sik Seong; Diana J Donovan; Yiping Shen; Eric Lally; Lauren A Weiss; Juliane Najm; Kerstin Kutsche; Maria Descartes; Lynn Holt; Stephen Braddock; Robin Troxell; Lee Kaplan; Fred Volkmar; Ami Klin; Katherine Tsatsanis; David J Harris; Ilse Noens; David L Pauls; Mark J Daly; Marcy E MacDonald; Cynthia C Morton; Bradley J Quade; James F Gusella
Journal:  Am J Hum Genet       Date:  2008-01       Impact factor: 11.025

5.  Strong association of de novo copy number mutations with sporadic schizophrenia.

Authors:  Bin Xu; J Louw Roos; Shawn Levy; E J van Rensburg; Joseph A Gogos; Maria Karayiorgou
Journal:  Nat Genet       Date:  2008-05-30       Impact factor: 38.330

6.  Association between microdeletion and microduplication at 16p11.2 and autism.

Authors:  Lauren A Weiss; Yiping Shen; Joshua M Korn; Dan E Arking; David T Miller; Ragnheidur Fossdal; Evald Saemundsen; Hreinn Stefansson; Manuel A R Ferreira; Todd Green; Orah S Platt; Douglas M Ruderfer; Christopher A Walsh; David Altshuler; Aravinda Chakravarti; Rudolph E Tanzi; Kari Stefansson; Susan L Santangelo; James F Gusella; Pamela Sklar; Bai-Lin Wu; Mark J Daly
Journal:  N Engl J Med       Date:  2008-01-09       Impact factor: 91.245

7.  A patient with vertebral, cognitive and behavioural abnormalities and a de novo deletion of NRXN1alpha.

Authors:  F R Zahir; A Baross; A D Delaney; P Eydoux; N D Fernandes; T Pugh; M A Marra; J M Friedman
Journal:  J Med Genet       Date:  2007-12-05       Impact factor: 6.318

8.  Higher risk of offspring schizophrenia following antenatal maternal exposure to severe adverse life events.

Authors:  Ali S Khashan; Kathryn M Abel; Roseanne McNamee; Marianne G Pedersen; Roger T Webb; Philip N Baker; Louise C Kenny; Preben Bo Mortensen
Journal:  Arch Gen Psychiatry       Date:  2008-02

9.  A recurrent 15q13.3 microdeletion syndrome associated with mental retardation and seizures.

Authors:  Andrew J Sharp; Heather C Mefford; Kelly Li; Carl Baker; Cindy Skinner; Roger E Stevenson; Richard J Schroer; Francesca Novara; Manuela De Gregori; Roberto Ciccone; Adam Broomer; Iris Casuga; Yu Wang; Chunlin Xiao; Catalin Barbacioru; Giorgio Gimelli; Bernardo Dalla Bernardina; Claudia Torniero; Roberto Giorda; Regina Regan; Victoria Murday; Sahar Mansour; Marco Fichera; Lucia Castiglia; Pinella Failla; Mario Ventura; Zhaoshi Jiang; Gregory M Cooper; Samantha J L Knight; Corrado Romano; Orsetta Zuffardi; Caifu Chen; Charles E Schwartz; Evan E Eichler
Journal:  Nat Genet       Date:  2008-02-17       Impact factor: 38.330

10.  Mapping and sequencing of structural variation from eight human genomes.

Authors:  Jeffrey M Kidd; Gregory M Cooper; William F Donahue; Hillary S Hayden; Nick Sampas; Tina Graves; Nancy Hansen; Brian Teague; Can Alkan; Francesca Antonacci; Eric Haugen; Troy Zerr; N Alice Yamada; Peter Tsang; Tera L Newman; Eray Tüzün; Ze Cheng; Heather M Ebling; Nadeem Tusneem; Robert David; Will Gillett; Karen A Phelps; Molly Weaver; David Saranga; Adrianne Brand; Wei Tao; Erik Gustafson; Kevin McKernan; Lin Chen; Maika Malig; Joshua D Smith; Joshua M Korn; Steven A McCarroll; David A Altshuler; Daniel A Peiffer; Michael Dorschner; John Stamatoyannopoulos; David Schwartz; Deborah A Nickerson; James C Mullikin; Richard K Wilson; Laurakay Bruhn; Maynard V Olson; Rajinder Kaul; Douglas R Smith; Evan E Eichler
Journal:  Nature       Date:  2008-05-01       Impact factor: 49.962

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  24 in total

1.  Rare CNVs and tag SNPs at 15q11.2 are associated with schizophrenia in the Han Chinese population.

Authors:  Qian Zhao; Tao Li; XinZhi Zhao; Ke Huang; Ti Wang; ZhiQiang Li; Jue Ji; Zhen Zeng; Zhao Zhang; Kan Li; GuoYin Feng; David St Clair; Lin He; YongYong Shi
Journal:  Schizophr Bull       Date:  2012-02-08       Impact factor: 9.306

2.  Modeling read counts for CNV detection in exome sequencing data.

Authors:  Michael I Love; Alena Myšičková; Ruping Sun; Vera Kalscheuer; Martin Vingron; Stefan A Haas
Journal:  Stat Appl Genet Mol Biol       Date:  2011-11-08

3.  Protein-protein interaction and pathway analyses of top schizophrenia genes reveal schizophrenia susceptibility genes converge on common molecular networks and enrichment of nucleosome (chromatin) assembly genes in schizophrenia susceptibility loci.

Authors:  Xiongjian Luo; Liang Huang; Peilin Jia; Ming Li; Bing Su; Zhongming Zhao; Lin Gan
Journal:  Schizophr Bull       Date:  2013-05-12       Impact factor: 9.306

4.  Global patterns of apparent copy number variation in birds revealed by cross-species comparative genomic hybridization.

Authors:  Benjamin M Skinner; Abdullah Al Mutery; Deborah Smith; Martin Völker; Nilofour Hojjat; Sannaa Raja; Steven Trim; Peter Houde; William J Boecklen; Darren K Griffin
Journal:  Chromosome Res       Date:  2014-04       Impact factor: 5.239

5.  Using latent class growth analysis to form trajectories of premorbid adjustment in schizophrenia.

Authors:  Veronica T Cole; José A Apud; Daniel R Weinberger; Dwight Dickinson
Journal:  J Abnorm Psychol       Date:  2012-01-16

6.  Advances in the genetics of schizophrenia: will high-risk copy number variants be useful in clinical genetics or diagnostics?

Authors:  David A Collier; Evangelos Vassos; Simon Holden; Christine Patch; Philip McGuire; Cathryn Lewis
Journal:  F1000 Med Rep       Date:  2009-08-17

Review 7.  Transcriptomics analysis of iPSC-derived neurons and modeling of neuropsychiatric disorders.

Authors:  Mingyan Lin; Herbert M Lachman; Deyou Zheng
Journal:  Mol Cell Neurosci       Date:  2015-11-26       Impact factor: 4.314

8.  Genetic associations of brain structural networks in schizophrenia: a preliminary study.

Authors:  Kanchana Jagannathan; Vince D Calhoun; Joel Gelernter; Michael C Stevens; Jingyu Liu; Federico Bolognani; Andreas Windemuth; Gualberto Ruaño; Michal Assaf; Godfrey D Pearlson
Journal:  Biol Psychiatry       Date:  2010-08-05       Impact factor: 13.382

9.  Elusive copy number variation in the mouse genome.

Authors:  Avigail Agam; Binnaz Yalcin; Amarjit Bhomra; Matthew Cubin; Caleb Webber; Christopher Holmes; Jonathan Flint; Richard Mott
Journal:  PLoS One       Date:  2010-09-21       Impact factor: 3.240

10.  Copy number variations of chromosome 16p13.1 region associated with schizophrenia.

Authors:  A Ingason; D Rujescu; S Cichon; E Sigurdsson; T Sigmundsson; O P H Pietiläinen; J E Buizer-Voskamp; E Strengman; C Francks; P Muglia; A Gylfason; O Gustafsson; P I Olason; S Steinberg; T Hansen; K D Jakobsen; H B Rasmussen; I Giegling; H-J Möller; A Hartmann; C Crombie; G Fraser; N Walker; J Lonnqvist; J Suvisaari; A Tuulio-Henriksson; E Bramon; L A Kiemeney; B Franke; R Murray; E Vassos; T Toulopoulou; T W Mühleisen; S Tosato; M Ruggeri; S Djurovic; O A Andreassen; Z Zhang; T Werge; R A Ophoff; M Rietschel; M M Nöthen; H Petursson; H Stefansson; L Peltonen; D Collier; K Stefansson; D M St Clair
Journal:  Mol Psychiatry       Date:  2009-09-29       Impact factor: 15.992

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