Literature DB >> 18986826

The plant B3 superfamily.

Kankshita Swaminathan1, Kevin Peterson, Thomas Jack.   

Abstract

The plant-specific B3 superfamily encompasses well-characterized families, such as the auxin response factor (ARF) family and the LAV family, as well as less well understood families, such as RAV and REM. In Arabidopsis, there are 118 B3 genes, and in rice there are 91 B3 genes. The B3 domain is present in genes from gymnosperms, mosses and green algae, indicating that the B3 domain evolved on the plant lineage before multicellularity. The aim of this review is to phylogenetically characterize the members of the B3 family in Arabidopsis and rice and to review the function of the B3 genes that have been studied to date.

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Year:  2008        PMID: 18986826     DOI: 10.1016/j.tplants.2008.09.006

Source DB:  PubMed          Journal:  Trends Plant Sci        ISSN: 1360-1385            Impact factor:   18.313


  83 in total

1.  Systematic analysis of plant-specific B3 domain-containing proteins based on the genome resources of 11 sequenced species.

Authors:  Yijun Wang; Dexiang Deng; Rong Zhang; Suxin Wang; Yunlong Bian; Zhitong Yin
Journal:  Mol Biol Rep       Date:  2012-05       Impact factor: 2.316

2.  Genes of the RAV Family Control Heading Date and Carpel Development in Rice.

Authors:  Michela Osnato; Luis Matias-Hernandez; Andrea Elizabeth Aguilar-Jaramillo; Martin M Kater; Soraya Pelaz
Journal:  Plant Physiol       Date:  2020-06-18       Impact factor: 8.340

3.  Positional cloning and characterization reveal the molecular basis for soybean maturity locus E1 that regulates photoperiodic flowering.

Authors:  Zhengjun Xia; Satoshi Watanabe; Tetsuya Yamada; Yasutaka Tsubokura; Hiroko Nakashima; Hong Zhai; Toyoaki Anai; Shusei Sato; Toshimasa Yamazaki; Shixiang Lü; Hongyan Wu; Satoshi Tabata; Kyuya Harada
Journal:  Proc Natl Acad Sci U S A       Date:  2012-05-22       Impact factor: 11.205

Review 4.  Refining the nuclear auxin response pathway through structural biology.

Authors:  David A Korasick; Joseph M Jez; Lucia C Strader
Journal:  Curr Opin Plant Biol       Date:  2015-06-03       Impact factor: 7.834

Review 5.  Molecular and epigenetic regulations and functions of the LAFL transcriptional regulators that control seed development.

Authors:  L Lepiniec; M Devic; T J Roscoe; D Bouyer; D-X Zhou; C Boulard; S Baud; B Dubreucq
Journal:  Plant Reprod       Date:  2018-05-24       Impact factor: 3.767

6.  Identification of a regulatory element responsible for salt induction of rice OsRAV2 through ex situ and in situ promoter analysis.

Authors:  Yong-Bo Duan; Juan Li; Rui-Ying Qin; Rong-Fang Xu; Hao Li; Ya-Chun Yang; Hui Ma; Li Li; Peng-Cheng Wei; Jian-Bo Yang
Journal:  Plant Mol Biol       Date:  2015-10-19       Impact factor: 4.076

7.  Transcription factors SOD7/NGAL2 and DPA4/NGAL3 act redundantly to regulate seed size by directly repressing KLU expression in Arabidopsis thaliana.

Authors:  Yueying Zhang; Liang Du; Ran Xu; Rongfeng Cui; Jianjun Hao; Caixia Sun; Yunhai Li
Journal:  Plant Cell       Date:  2015-03-17       Impact factor: 11.277

8.  Transcriptome dynamics of developing maize leaves and genomewide prediction of cis elements and their cognate transcription factors.

Authors:  Chun-Ping Yu; Sean Chun-Chang Chen; Yao-Ming Chang; Wen-Yu Liu; Hsin-Hung Lin; Jinn-Jy Lin; Hsiang June Chen; Yu-Ju Lu; Yi-Hsuan Wu; Mei-Yeh Jade Lu; Chen-Hua Lu; Arthur Chun-Chieh Shih; Maurice Sun-Ben Ku; Shin-Han Shiu; Shu-Hsing Wu; Wen-Hsiung Li
Journal:  Proc Natl Acad Sci U S A       Date:  2015-04-27       Impact factor: 11.205

9.  The Arabidopsis B3 domain protein VERNALIZATION1 (VRN1) is involved in processes essential for development, with structural and mutational studies revealing its DNA-binding surface.

Authors:  Gordon J King; Aurélie H Chanson; Emily J McCallum; Masaru Ohme-Takagi; Karl Byriel; Justine M Hill; Jennifer L Martin; Joshua S Mylne
Journal:  J Biol Chem       Date:  2012-12-19       Impact factor: 5.157

10.  Structural mechanisms for the 5'-CCWGG sequence recognition by the N- and C-terminal domains of EcoRII.

Authors:  Dmitrij Golovenko; Elena Manakova; Giedre Tamulaitiene; Saulius Grazulis; Virginijus Siksnys
Journal:  Nucleic Acids Res       Date:  2009-09-03       Impact factor: 16.971

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