Literature DB >> 18984694

Thermoanaerobacter uzonensis sp. nov., an anaerobic thermophilic bacterium isolated from a hot spring within the Uzon Caldera, Kamchatka, Far East Russia.

Isaac D Wagner1, Weidong Zhao, Chuanlun L Zhang, Christopher S Romanek, Manfred Rohde, Juergen Wiegel.   

Abstract

Several strains of heterotrophic, anaerobic thermophilic bacteria were isolated from hot springs of the Uzon Caldera, Kamchatka, Far East Russia. Strain JW/IW010(T) was isolated from a hot spring within the West sector of the Eastern Thermal field, near Pulsating Spring in the Winding Creek area. Cells of strain JW/IW010(T) were straight to slightly curved rods, 0.5 mum in width and variable in length from 2 to 5 mum and occasionally up to 15 mum, and formed oval subterminal spores. Cells stained Gram-negative, but were Gram-type positive. Growth was observed between 32.5 and 69 degrees C with an optimum around 61 degrees C (no growth occurred at or below 30 degrees C, or at or above 72 degrees C). The pH(60 degrees C) range for growth was 4.2-8.9 with an optimum at 7.1 (no growth occurred at or below pH(60 degrees C) 3.9, or at 9.2 or above). The shortest observed doubling-time at pH(60 degrees C) 6.9 and 61 degrees C was 30 min. Strain JW/IW010(T) was chemo-organotrophic; yeast extract, peptone, Casamino acids and tryptone supported growth. Yeast extract was necessary for the utilization of non-proteinaceous substrates, and growth was observed with inulin, cellobiose, maltose, sucrose, glucose, fructose, galactose, mannose, xylose, trehalose, mannitol, pyruvate and crotonate. The G+C content of the genomic DNA of strain JW/IW010(T) was 33.6 mol% (HPLC method). The major phospholipid fatty acids were iso-15 : 0 (53.5 %), 15 : 0 (11.8 %), 16 : 0 (7.3 %), 10-methyl 16 : 0 (7.3 %) and anteiso-15 : 0 (5.3 %). 16S rRNA gene sequence analysis placed strain JW/IW010(T) in the genus Thermoanaerobacter of the family 'Thermoanaerobacteriaceae' (Firmicutes), with Thermoanaerobacter sulfurigignens JW/SL-NZ826(T) (97 % 16S rRNA gene sequence similarity) and Thermoanaerobacter kivui DSM 2030(T) (94.5 %) as the closest phylogenetic relatives with validly published names. The level of DNA-DNA relatedness between strain JW/IW010(T) and Thermoanaerobacter sulfurigignens JW/SL-NZ826(T) was 64 %. Based on the physiological, phylogenetic and genotypic data, strain JW/IW010(T) represents a novel taxon, for which the name Thermoanaerobacter uzonensis sp. nov. is proposed. The type strain is JW/IW010(T) (=ATCC BAA-1464(T)=DSM 18761(T)). The effectively published strain, 1501/60, of 'Clostridium uzonii' [Krivenko, V. V., Vadachloriya, R. M., Chermykh, N. A., Mityushina, L. L. & Krasilnikova, E. N. (1990). Microbiology (English translation of Mikrobiologiia) 59, 741-748] had approximately 88.0 % DNA-DNA relatedness with strain JW/IW010(T) and was included in the novel taxon.

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Year:  2008        PMID: 18984694     DOI: 10.1099/ijs.0.65343-0

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  8 in total

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Authors:  G B Slobodkina; R V Baslerov; N K Kostryukova; E A Bonch-Osmolovskaya; A I Slobodkin
Journal:  Extremophiles       Date:  2018-06-18       Impact factor: 2.395

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Journal:  Extremophiles       Date:  2019-09-25       Impact factor: 2.395

3.  Comparative geochemical and microbiological characterization of two thermal pools in the Uzon Caldera, Kamchatka, Russia.

Authors:  Elizabeth A Burgess; Jason M Unrine; Gary L Mills; Christopher S Romanek; Juergen Wiegel
Journal:  Microb Ecol       Date:  2011-11-29       Impact factor: 4.552

4.  Hot springs of Indian Himalayas: potential sources of microbial diversity and thermostable hydrolytic enzymes.

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Journal:  3 Biotech       Date:  2017-05-31       Impact factor: 2.406

5.  Multilocus sequence analysis of Thermoanaerobacter isolates reveals recombining, but differentiated, populations from geothermal springs of the Uzon Caldera, Kamchatka, Russia.

Authors:  Isaac D Wagner; Litty B Varghese; Christopher L Hemme; Juergen Wiegel
Journal:  Front Microbiol       Date:  2013-06-21       Impact factor: 5.640

6.  Young «oil site» of the Uzon Caldera as a habitat for unique microbial life.

Authors:  Sergey E Peltek; Alla V Bryanskaya; Yuliya E Uvarova; Aleksey S Rozanov; Timofey V Ivanisenko; Vladimir A Ivanisenko; Elena V Lazareva; Olga V Saik; Vadim M Efimov; Sergey M Zhmodik; Oxana P Taran; Nikolay M Slynko; Sergey V Shekhovtsov; Valentin N Parmon; Nikolay L Dobretsov; Nikolay A Kolchanov
Journal:  BMC Microbiol       Date:  2020-11-24       Impact factor: 3.605

7.  Production of ethanol from sugars and lignocellulosic biomass by Thermoanaerobacter J1 isolated from a hot spring in Iceland.

Authors:  Jan Eric Jessen; Johann Orlygsson
Journal:  J Biomed Biotechnol       Date:  2012-10-14

8.  Isolation and characterization of a new CO-utilizing strain, Thermoanaerobacter thermohydrosulfuricus subsp. carboxydovorans, isolated from a geothermal spring in Turkey.

Authors:  Melike Balk; Hans G H J Heilig; Miriam H A van Eekert; Alfons J M Stams; Irene C Rijpstra; Jaap S Sinninghe-Damsté; Willem M de Vos; Servé W M Kengen
Journal:  Extremophiles       Date:  2009-08-23       Impact factor: 2.395

  8 in total

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