Literature DB >> 18978346

Linkage analysis in keratoconus: replication of locus 5q21.2 and identification of other suggestive Loci.

Luigi Bisceglia1, Patrizia De Bonis, Costantina Pizzicoli, Lucia Fischetti, Antonio Laborante, Michele Di Perna, Francesco Giuliani, Nicola Delle Noci, Luca Buzzonetti, Leopoldo Zelante.   

Abstract

PURPOSE: Keratoconus (KC) is the most common indication for corneal transplantation in the Western world, with etiologic mechanisms still poorly understood. The disease prevalence in the general population is approximately 1:2000, and familial aggregation, together with increased familial risk, suggests important genetic influences on its pathogenesis. To date, several loci for familial keratoconus have been described, without the identification of any responsible gene in the respective mapped intervals. The aim of this study was to identify causative/susceptibility genes for keratoconus.
METHODS: A total of 133 individuals (77 affected and 59 unaffected) of 25 families from southern Italy were genotyped using microsatellite markers and included in a genome-wide scan. Nonparametric and parametric analysis using an affected-only strategy were calculated by using genetic algorithm software.
RESULTS: The chromosomal regions 5q32-q33, 5q21.2, 14q11.2, 15q2.32 exhibited the strongest evidence of linkage by nonparametric analysis (NPL = 3.22, 2.73, 2.62, and 2.32, respectively). The regions 5q32-q33 and 14q11.2 were also supported by multipoint parametric analysis, for which heterogeneity LOD (HLOD) scores of 2.45 (alpha = 0.54) and 2.09 (alpha = 0.46), respectively, were obtained under an affected-only dominant model.
CONCLUSIONS: This study represents the first KC linkage replication study on the chromosomal region 5q21.2 and reports evidence of suggestive linkage in several regions for which suggestive or significant linkage has been previously detected in different populations.

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Year:  2008        PMID: 18978346     DOI: 10.1167/iovs.08-2382

Source DB:  PubMed          Journal:  Invest Ophthalmol Vis Sci        ISSN: 0146-0404            Impact factor:   4.799


  40 in total

1.  A genome-wide association study identifies a potential novel gene locus for keratoconus, one of the commonest causes for corneal transplantation in developed countries.

Authors:  Xiaohui Li; Yelena Bykhovskaya; Talin Haritunians; David Siscovick; Anthony Aldave; Loretta Szczotka-Flynn; Sudha K Iyengar; Jerome I Rotter; Kent D Taylor; Yaron S Rabinowitz
Journal:  Hum Mol Genet       Date:  2011-10-06       Impact factor: 6.150

2.  Association of polymorphisms in the hepatocyte growth factor gene promoter with keratoconus.

Authors:  Kathryn P Burdon; Stuart Macgregor; Yelena Bykhovskaya; Sharhbanou Javadiyan; Xiaohui Li; Kate J Laurie; Dorota Muszynska; Richard Lindsay; Judith Lechner; Talin Haritunians; Anjali K Henders; Durga Dash; David Siscovick; Seema Anand; Anthony Aldave; Douglas J Coster; Loretta Szczotka-Flynn; Richard A Mills; Sudha K Iyengar; Kent D Taylor; Tony Phillips; Grant W Montgomery; Jerome I Rotter; Alex W Hewitt; Shiwani Sharma; Yaron S Rabinowitz; Colin Willoughby; Jamie E Craig
Journal:  Invest Ophthalmol Vis Sci       Date:  2011-10-31       Impact factor: 4.799

3.  A new locus on 3p23-p25 for an autosomal-dominant limb-girdle muscular dystrophy, LGMD1H.

Authors:  Luigi Bisceglia; Stefano Zoccolella; Alessandra Torraco; Maria Rosaria Piemontese; Rosa Dell'Aglio; Angela Amati; Patrizia De Bonis; Lucia Artuso; Massimiliano Copetti; Filippo Maria Santorelli; Luigi Serlenga; Leopoldo Zelante; Enrico Bertini; Vittoria Petruzzella
Journal:  Eur J Hum Genet       Date:  2010-01-13       Impact factor: 4.246

Review 4.  The impairment of lysyl oxidase in keratoconus and in keratoconus-associated disorders.

Authors:  Lubica Dudakova; Katerina Jirsova
Journal:  J Neural Transm (Vienna)       Date:  2013-02-20       Impact factor: 3.575

5.  Classification of posterior polymorphous corneal dystrophy as a corneal ectatic disorder following confirmation of associated significant corneal steepening.

Authors:  Anthony J Aldave; Lydia B Ann; Ricardo F Frausto; Catherine K Nguyen; Fei Yu; Irving M Raber
Journal:  JAMA Ophthalmol       Date:  2013-12       Impact factor: 7.389

6.  Novel mutation and three other sequence variants segregating with phenotype at keratoconus 13q32 susceptibility locus.

Authors:  Marta Czugala; Justyna A Karolak; Dorota M Nowak; Piotr Polakowski; Jose Pitarque; Andrea Molinari; Malgorzata Rydzanicz; Bassem A Bejjani; Beatrice Y J T Yue; Jacek P Szaflik; Marzena Gajecka
Journal:  Eur J Hum Genet       Date:  2011-11-02       Impact factor: 4.246

7.  The Genetics of Keratoconus: A Review.

Authors:  Joshua Wheeler; Michael A Hauser; Natalie A Afshari; R Rand Allingham; Yutao Liu
Journal:  Reprod Syst Sex Disord       Date:  2012-06-03

8.  Linkage Analysis of High-density SNPs Confirms Keratoconus Locus at 5q Chromosomal Region.

Authors:  Yelena Bykhovskaya; Xiaohui Li; Kent D Taylor; Talin Haritunians; Jerome I Rotter; Yaron S Rabinowitz
Journal:  Ophthalmic Genet       Date:  2014-02-20       Impact factor: 1.803

9.  Sequence variants in COL4A1 and COL4A2 genes in Ecuadorian families with keratoconus.

Authors:  Justyna A Karolak; Karolina Kulinska; Dorota M Nowak; Jose A Pitarque; Andrea Molinari; Malgorzata Rydzanicz; Bassem A Bejjani; Marzena Gajecka
Journal:  Mol Vis       Date:  2011-03-30       Impact factor: 2.367

10.  An association between the calpastatin (CAST) gene and keratoconus.

Authors:  Xiaohui Li; Yelena Bykhovskaya; Yongming G Tang; Yoana Picornell; Talin Haritunians; Anthony J Aldave; Loretta Szczotka-Flynn; Sudha K Iyengar; Jerome I Rotter; Kent D Taylor; Yaron S Rabinowitz
Journal:  Cornea       Date:  2013-05       Impact factor: 2.651

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